Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00493 ATGGACATTGTTGCTCTATTAACTTCTGCTGGAATTAACATTGCTGTATGTCTGGTGCTCTTTTCACTTTATTCTATATTAAGAAAACAGCCCGGCAATGTTAATGTGTACTTTGGACGGAGACTAGCATCTCAGCATTCAAGACACGTTGATTTCTGGCTGGAAAGATTTGTTCCCTCTCCTGGCTGGATATTAAAAGCGTGGGAACCATCTGAGAGTGAGATATTGGCTATTGGTGGCTTGGATGCTGTAGTTTTTGTAAGGATAGTTTTGTTCAGTATTCGAGTATTTTGCATTGCTTCTGTCATCTGCACTGTTCTAGTGCTTCCTGTGAATTACTACGGTACATACCAAGTGGATAAGAAAACTCAAAGAAGGTCACTGGAAATATATACCATTGAGAATGTCAAACAAGGTTCAACATGGCTCTGGGCTCATTGTCTTGCATTATACATCATAACACTTGCAGCCTGCACTCTTCTTTACTTTGAATTCAAGAAAATTACTAAGTTGAGGCTACAGCATATTAGTGAATCTCCTCCAAGTCCAAGCCATTTTACTATTCTTGTCCGATCAATCCCCTGGTCTGCAGACGAATCGTACTGTGACACAGTGAACAAATTCTTCTCATATTACCACGCATCAACATATTTGTCTCACCAGATGATTTATGACTATGGCAAAGTTCAGAAAATGAAGGACGAGGCTGAACAAATGTGCAAAGTATTTAGAGATGCTTCATTGGAAAAGTCTGGTAAACCAAGTTTTGTGCCATGTTGCTGTTTGGGACCCACAGATTCTTTTAAGTTGGGTTCTAATGAGATGAGTAGTATTCATGGGAAAACATGCTACACTGACATAGATGCAAGGAAAAAGGAATTCCCAGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGGTGCTCATATCGCTGCACAGACTATGCAAACATCAAATCCTATGGTATGGGTGACAGAAACAGCTCCTGAACCACATGATGTTCACTGGTCTCACATTCGTGTACCATATAGGCAAATTTGGATCCGTAAGATGGCTACGTTTGTGGCTTCGGTTGCCTTCATGCTTGTGTTCCTTATCCCAGTTACATTTGTACAAGGCTTAACTCAACTAGAAAAGCTTCAGAAAATGTTCCCTTTTTTGACAGGGGTACTTAAAGAGCCATATGTGAAACAGGTGGCGATTGGTTACCTACCAAGTGTGATAttggttatatttttgtgtGCAGTTCCACCTGTGATGATGCTATTTTCAACAGTCGAGGGTTCTATTTCCCGCAGTGGAAGGAAGAAAAGTGCATGTTGGAAAGTTTTGTACTTCACAATCTGGAATGTGttttttgttaatgtttttACTGGTTCTCTTATCAATCAAATTTTAGTCTTTTCTAGCATAAAAGACCTGCCTGCACAACTTGCGAAGGCAGTACCCTCTCAGGCTACCTTCTTCACGACTTATGTTTTGTCATCTGGTTGGGCAAGTTTGGGATTTGAACTTCTGCAAATTTGTCCTCTTTTATACAATCTATTCCAGAAATTCATACTCAGGGTTAAGGATGATACACTTGGTGGCATATCTTTTCCATACCATACAGAAGTTCCAAGGCTATTACTGTTTGGATTTCTTGGGTTCACCTGTTCTATTCTGGCACCTCTAATGCTTCCCTTCTTAGTGGTCTACTTTTTGCTTGCGTACCTAGTTTACCGAAACCAGATTCTTAACGTGTACATTACAAAATACGATAGTGGAGGACAATATTGGCCTATTGCACACAAAACAACGGTCTTCTCTTTGCTAGTTGCTCAACTTATTGCACTTGGGGTGTTTGGACTAAAACGCTCTACAGTTGCATCTGGATTTACCATTCCCTTGATCATTGTTACCATTCTTTTTGACCAGTATTGTAGGCAACGATTTATCCCCGTATTTAAAAACAATTCAGCACAGATTCTTATTGACATGGATAAGAAAGATGAACAATGTGGAAAGATGGAAGAGATTTATGAACAATTACGTTCAGCCTACCACCAACCCATGTTAGTGCCACATGCGCCAACAACCCCATCCGAATGCCCCAGCCCACAAGAGGACAAACGGTTTATTGAGAGTTCAGCAGATATTGAGAAAGGCAAAGAAGTTAGTCAACAACATAGACCGGGGCCTGTTCATCGCACGGTGAGTTCGAGCTTGGATAAATTGGTACTTGGTGGAAATCAAATTTGCGATCCGGCTTGTACATTGAATAAGAATATTCCAGATGTGTCTGATGATCCAGTACATCAACATCTAATTAATGATGGATTATGA 2322 0.3992 MDIVALLTSAGINIAVCLVLFSLYSILRKQPGNVNVYFGRRLASQHSRHVDFWLERFVPSPGWILKAWEPSESEILAIGGLDAVVFVRIVLFSIRVFCIASVICTVLVLPVNYYGTYQVDKKTQRRSLEIYTIENVKQGSTWLWAHCLALYIITLAACTLLYFEFKKITKLRLQHISESPPSPSHFTILVRSIPWSADESYCDTVNKFFSYYHASTYLSHQMIYDYGKVQKMKDEAEQMCKVFRDASLEKSGKPSFVPCCCLGPTDSFKLGSNEMSSIHGKTCYTDIDARKKEFPAAFVFFKSRYGAHIAAQTMQTSNPMVWVTETAPEPHDVHWSHIRVPYRQIWIRKMATFVASVAFMLVFLIPVTFVQGLTQLEKLQKMFPFLTGVLKEPYVKQVAIGYLPSVILVIFLCAVPPVMMLFSTVEGSISRSGRKKSACWKVLYFTIWNVFFVNVFTGSLINQILVFSSIKDLPAQLAKAVPSQATFFTTYVLSSGWASLGFELLQICPLLYNLFQKFILRVKDDTLGGISFPYHTEVPRLLLFGFLGFTCSILAPLMLPFLVVYFLLAYLVYRNQILNVYITKYDSGGQYWPIAHKTTVFSLLVAQLIALGVFGLKRSTVASGFTIPLIIVTILFDQYCRQRFIPVFKNNSAQILIDMDKKDEQCGKMEEIYEQLRSAYHQPMLVPHAPTTPSECPSPQEDKRFIESSADIEKGKEVSQQHRPGPVHRTVSSSLDKLVLGGNQICDPACTLNKNIPDVSDDPVHQHLINDGL 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00493 773 Pfam Calcium-dependent channel, 7TM region, putative phosphate 348 614 IPR003864 GO:0016020
Tsu01g00493 773 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 337 IPR027815 -
Tsu01g00493 773 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 730 - -
Tsu01g00493 773 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 730 IPR045122 GO:0005227
Tsu01g00493 773 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00493 Tsu-Chr1 4267662 4277233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00493 K21989 - gmx:100796574 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00493 01 4267662 4277233 Tsu01g00493 01 4267662 4277233 ECH
Tsu01g00493 01 4267662 4277233 Tsu07g00841 07 6885217 6890629 PCT