Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00492 ATGATGTCAAGAAGACCGGGTAATCCTTCTAGAAGATTCGGTGATGGTAAATCCAAATCATCACCAGTTTTATCAATTGGTCTTATTGTTGTGGGAGCTTTGTTTATCGTTGGTTACGTGTACAGAGGCTCAGGTGGACTTGGAAGCCGTTTAGATTCTGTTAGCAGGGTTGAAGGTGATTATTTGTGCAGTGGAGAGGTCCAACGAGCGATTCCTGTTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGTCCTGATACGTGCTACGTGGTTTCTAAATTGCAAAAGGAGGATGAAACTGAAGCCTGGGGTATAGAACCGTATGATATAGAGGATGCCGATAGTAGTTGCAAATCACTAATCCGTAGAGGCAATGTGCGTGTCGCTGATATCAAGTTTCCTCTTCCATATAGGCCAAAATCTTTTTCTCTTGTAATTGTTTCAGATACTCTGGATTACCTATCCCCCAGATACCTCAATAAAACTCTTCCAGATTTGGTGAGGGTATCAGCTGATGGTTTAGTGATATTTACTGGTTTTCCATCTAATCAGAAGGCCAAGGTAGCAGATGTTTCCAAATTTGGAAGAGCGGCCAAGATGAGGAGTGGATCCTGGTGGGTCAAGTTTTTCCTTCAAAACAACTTAGAGGAGAATGAAGCTATTAATAAGAAGTTTGAGCAAGCTTCAACGCAGAGTTCATTTGTTCCAAAATGCCAGATATTCCACTTGAAGTCACTCCATTGA 759 0.4137 MMSRRPGNPSRRFGDGKSKSSPVLSIGLIVVGALFIVGYVYRGSGGLGSRLDSVSRVEGDYLCSGEVQRAIPVLQKAYGDSMHKVLHVGPDTCYVVSKLQKEDETEAWGIEPYDIEDADSSCKSLIRRGNVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPDLVRVSADGLVIFTGFPSNQKAKVADVSKFGRAAKMRSGSWWVKFFLQNNLEENEAINKKFEQASTQSSFVPKCQIFHLKSLH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00492 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 222 IPR029063 -
Tsu01g00492 252 Coils Coil 216 236 - -
Tsu01g00492 252 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g00492 252 PANTHER PROTEIN, PUTATIVE-RELATED 2 252 - -
Tsu01g00492 252 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 2 252 IPR044689 GO:0008168|GO:0045488
Tsu01g00492 252 Gene3D Vaccinia Virus protein VP39 74 248 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00492 Tsu-Chr1 4259015 4262871 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00492 K23871 - gmx:100796049 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00492 01 4259015 4262871 Tsu01g00492 01 4259015 4262871 ECH