Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00474 ATGTCGTCCTTCTATGAAGAGGAATTTCCGGTGCAATTCATGTGTAATCCGGTTCACGAAATCATGTTCACACAAGACGAAATAGAGGAGTTATTTTCCCTCATTAACCAACCGGTTGACCCGTCCAGTCCAGAGTCCGGTTCACAAGGGTCAAATCGGGTGGTTTACTCAACACACGAGAGAAAAATAAGGAGAATGCAATCAAACCGGGAGTCAGCTAGGCGATCTCGTTGGAGAAAGAAGCGTCATGTAGAGAACCTCAATAATGATGTGAACCGGTTGAAAATGGAAAACCGAGAACTAAAAAATCAACTCGGGTTAACCATGCAATACAATCTTATGTTATCCGCCGAGAATCAACGTCTAAAATCAGAATCAATATCACTTTTGGCAAGACTTTTGGATCTAAATCGAACTTTAGGGATCATAATTTCACAATAG 441 0.4127 MSSFYEEEFPVQFMCNPVHEIMFTQDEIEELFSLINQPVDPSSPESGSQGSNRVVYSTHERKIRRMQSNRESARRSRWRKKRHVENLNNDVNRLKMENRELKNQLGLTMQYNLMLSAENQRLKSESISLLARLLDLNRTLGIIISQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00474 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Tsu01g00474 146 MobiDBLite consensus disorder prediction 37 56 - -
Tsu01g00474 146 Pfam bZIP transcription factor 61 106 IPR004827 GO:0003700|GO:0006355
Tsu01g00474 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 23 145 - -
Tsu01g00474 146 Coils Coil 56 76 - -
Tsu01g00474 146 MobiDBLite consensus disorder prediction 37 79 - -
Tsu01g00474 146 Coils Coil 84 104 - -
Tsu01g00474 146 Gene3D - 59 112 - -
Tsu01g00474 146 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Tsu01g00474 146 PANTHER BZIP TRANSCRIPTION FACTOR 23 145 - -
Tsu01g00474 146 CDD bZIP_plant_GBF1 62 110 IPR045314 GO:0003700|GO:0006355
Tsu01g00474 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 105 IPR004827 GO:0003700|GO:0006355
Tsu01g00474 146 MobiDBLite consensus disorder prediction 57 73 - -
Tsu01g00474 146 SUPERFAMILY Leucine zipper domain 61 115 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00474 Tsu-Chr1 4094456 4094896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00474 17 140 bZIP Transcription Factor Family AT3G49760 37.405 1.81e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g00474 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00474 - - gmx:102661984 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00474 01 4094456 4094896 Tsu07g00855 07 7002600 7003037 PCT