Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00481 ATGGACCTTTCCCAATCTCCCACTTTCCTCTTTTTCACTGTCATCCTCACCATCCTTGCTTCCGTCTCCGGTAGCCGTGACCTTCCCGGAGACTATATCCGATTGCCTTCTCAAGCCTCCAGGTTCTTCCACGAACCTGAAAATGATGACAACGTTCAAGGGACTAGATGGGCTATCTTACTTGCTGGTTCTAATGGTTACTGGAATTATAGGCATCAGGCTGATGTTTGTCATGCATATCAAATACTGAGGAAAGGTGGCTTAAAAGAAGAAAACATTATAGTTTTCATGTATGATGACATTGCTTCCAATGTAGAGAATCCAAGGCCTGGTGTAATAATTAACAAACCAGATGGTGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGTGCAGATGTACATGCTGACAATTTCTATGCTGCTTTACTTGGAAATAAATCAGCTCTTACAGGTGGGAGTGGGAAAGTTGTGGATAGTGGCCCCAATGATCATATTTTTGTATACTACACTGATCATGGAGGTCCTGGGGTTCTTGGTATGCCTGTTGGTCCTTACCTGTATGCATCTGATCTGAATGAAGTCTTAAAGAAAAAGCATGCTTCTGGAGGATATAAGAGCCTAGTATTTTATCTTGAGGCATGTGAATCCGGGAGTATCTTTGAAGGCCTTCTTCCGGAAGATATCGATATCTATGCAACAACCGCTTCAAATGCGGAAGAAAGCAGTTGGGGAACATATTGCCCTGGCGAATACCCTCCCCCTCCCCCAGAGTACTCAACCTGCCTGGGTGACCTTTACAGCATTGCTTGGATGGAAGACAGTGACGTACACAATTTGCGAACTGAAAGTTTACACCAGCAATATAAAACGGTTAAAGATAGGACTATCAATGGGGCATACTATGGTTCTCATGTGATGGAGTATGGTGATGTAGGACTTAGCAACAATCACCTCTTCTTATATTTGGGAACAAATCCTGCTAATGATAATATTAGTTTTGTGGATGAAAGTGTCTTGAAATTGAGATCACCTTCGACAGCAGTTAACCAAAGGGATGCCGATCTCATCCATTTCTGGGATAAGTTCCGCAAAGCTCCTGAGGGTTCTCCGCGGAAAAATGAAGCTCAGAAACAAGTTTTGGAAGCAATGTCTCACAGGATGCATGTAGACAACAGTGTGGAACTTATTGGGAAGCTCTTATTCGGAATCGAAAAGAGTCCTACACTGCTCAATGTTGTTAGACCTTCTGGATCACCGCTTGTTGATAACTGGGACTGCCTTAAAACCATGGTGAGAACTTTTGAGACACATTGCGGATCTCTATCTCAGTATGGTATGAAACATATGAGGTCCTTTGCGAACATCTGCAATGCAGGAATACCGAATGAGCAAATGGTCGAGGCCTCAGCACAAGCTTGTGCTAGTATTCCTGCCAACCCCTGGAGTTCTCTGCAAGGAGGTTTCAGTGCATAG 1479 0.4361 MDLSQSPTFLFFTVILTILASVSGSRDLPGDYIRLPSQASRFFHEPENDDNVQGTRWAILLAGSNGYWNYRHQADVCHAYQILRKGGLKEENIIVFMYDDIASNVENPRPGVIINKPDGGDVYEGVPKDYTGADVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDLNEVLKKKHASGGYKSLVFYLEACESGSIFEGLLPEDIDIYATTASNAEESSWGTYCPGEYPPPPPEYSTCLGDLYSIAWMEDSDVHNLRTESLHQQYKTVKDRTINGAYYGSHVMEYGDVGLSNNHLFLYLGTNPANDNISFVDESVLKLRSPSTAVNQRDADLIHFWDKFRKAPEGSPRKNEAQKQVLEAMSHRMHVDNSVELIGKLLFGIEKSPTLLNVVRPSGSPLVDNWDCLKTMVRTFETHCGSLSQYGMKHMRSFANICNAGIPNEQMVEASAQACASIPANPWSSLQGGFSA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00481 492 Gene3D - 352 480 IPR046427 -
Trre1g00481 492 PANTHER HEMOGLOBINASE FAMILY MEMBER 14 477 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 FunFam Vacuolar-processing enzyme beta-isozyme 54 350 - -
Trre1g00481 492 PIRSF AE 4 492 IPR043577 GO:0004197|GO:0051603
Trre1g00481 492 FunFam Vacuolar-processing enzyme beta-isozyme 352 480 - -
Trre1g00481 492 PRINTS Hemoglobinase (C13) cysteine protease signature 82 111 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 PRINTS Hemoglobinase (C13) cysteine protease signature 206 222 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 PRINTS Hemoglobinase (C13) cysteine protease signature 157 176 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 PRINTS Hemoglobinase (C13) cysteine protease signature 57 81 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 PRINTS Hemoglobinase (C13) cysteine protease signature 129 144 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 Pfam Peptidase C13 family 56 325 IPR001096 GO:0006508|GO:0008233
Trre1g00481 492 CDD legumain_C 354 475 - -
Trre1g00481 492 Gene3D - 54 349 - -
Trre1g00481 492 PIRSF Legumain 4 492 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00481 Trre-Chr1 3592249 3596194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00481 K01369 - gmx:547700 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00481 1 3592249 3596194 Trre1g00481 1 3592249 3596194 ECH