Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00476 ATGGTGAACTACTTGTTGATGATCAGCGGTGAGCTCGAGAACTTGACCAATCTTCAACCTCAAGGTGGCGTCGATGACCCCAATTTCTCCTATTTCTTCAAGTTGAAATGTGGAAGATGTGGTGAAGTGAGCCAAAAAGAAACTTGTGTGTCTTTAAACGACACCGTTCCTCTCCCAGCTGGTAGGGGCACTACTCATCTTGTTCAAAAGTGCAAGTTTTGTTCCAGGGAGAGCACTGTAACTATGATCCCAGGCAGAGGAAAACCACTCACCAATGAAACAAGTGAATCAGGGAAGTTTTCCCCCCTGATGTTATTTGACTGCAGGGGCTATGAGCCGATAGATTTTATATTCAGCACTGGATGGAAAGTTGAGTCGCTGGAGGGAACAAAGTTTGAGAATGTTGACTTGTCAAGCGGAGATTTCACCGAATATGATGAAAAGGGAGAGTGTCCAGTCATGATATCCAATCTTCGTGCTACTTTTGATGTGGTGAAGTAA 501 0.4431 MVNYLLMISGELENLTNLQPQGGVDDPNFSYFFKLKCGRCGEVSQKETCVSLNDTVPLPAGRGTTHLVQKCKFCSRESTVTMIPGRGKPLTNETSESGKFSPLMLFDCRGYEPIDFIFSTGWKVESLEGTKFENVDLSSGDFTEYDEKGECPVMISNLRATFDVVK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00476 166 PANTHER UNCHARACTERIZED 1 165 IPR008584 -
Trre1g00476 166 Pfam CXXC motif containing zinc binding protein, eukaryotic 6 162 IPR008584 -
Trre1g00476 166 SUPERFAMILY MAL13P1.257-like 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00476 Trre-Chr1 3546762 3549799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00476 - - gmx:100500192 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00476 1 3546762 3549799 Trre1g00476 1 3546762 3549799 ECH