Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00468 ATGAAGAGAGGGAAGGGTGGTGATGGTGATGATGATGATGAGAAGGTGGGACCCATGTTCCCAAGGCTCCATGTCAATGACACAACGGACAAAGGAGGACCAAGAGCACCACCAAGGAATAAGATGGCACTCTATGAACAGTTTACTGTTCCATTTCAAAGATTCAACCCCAATTCAAATTCTTCTAATTCACTTCCTCTAACACCTTCCTCCATCATGGGAAATGACCCTAAGAGAAGCTACATGTTGCCAGTTCGCTTACCTTCACAAACGGATAACCATCGAGCTGAAAGTTATATTTCTCACCAATCTAATGGAGAAAACTTGGACACTTTGTCAGCACAACTTGAACAGAGAAAAAAGGGTGAAGGGCATCTGCAAGTAAGCTCAAGTAGACAGAAAACAGTAATGTCTGTCGAAAGCATATTGACAGGAGAATTTATTGACAGCCCAATGAGGCAAACCGAGAAGGTTCTAGATGAAGAGGATCAACATTGTTCTGCGTCAAATATAAGCAGGTTGCATAAGGGTGATGCTTGCATGCCACAGGAATCCAATGACATTGAACATAGTGACGATCTCCTTAACTCAGAAGGAAGTGACGATCTTTCCAAGATCTCCACTCTAGAAGATTTGTCAAGCCTGAAACTTTCTCCTGATGGTGTCGTACAGATATTAGGTCAACAACTTTTTTGGAAAGCAAGACGAAAAATTACCAATCAACAGAGAATGTATGCGGTCCAAGTGTTTGAGTTGCACAGACTGATAAAGGTCCAACAGCTGATTGCTGGATCATCAGATCTTTTGCTTGAAGATGCTGCTATTTTGGAAAAGTTTCCTCTGCAGGAATCTACTCCTAAAAGTCTCTCATTGGAAGTTGTCGTTGAACCTCAGACACAAAATCATAAACAGCAAGACCATTCTGAAAACCTAAACCGTAAATCGGAATGTTCTGCTGAAAATGGAGTAGAGAAAACATCCTTTACATACCAAAGTTATGGTAGCCACCTTTCAAATTACGCCCCTTTTCCTGGAAATCCTCAACAGGAAAATGTAGGTTCTCAAGGTTTCAATCAGTCACCTGGACATCAGTGGTTAATTCCTGTTATGTCTCCTTCCGAAGGGCTTGTCTACAAGCCAGTATTACCTGGTCCTGGATTTAACGGAGCAGTGTATGGAGGATGTGGGCCGTTTGGACAAGGTCCTCCTGATGGTACAGTCATGAATCCTGCCTATGGAGTTCCAAATTTTCATCAAGCGATTACTGTTTCACCGTTCATTCCTCCAAGCAGTTATGCCTACTTCACTCCTCATGGCATGCCAGCAGCAATGAATCAATCAGCATCAGGGTCAGTTGTTGAACAGGCGAGCCAGTTTGTTGCACACGGTTCTCATGATCAAAACAGTAATTCATCTTTAGTTGGAGCCGATTTTGGCACACATAATCAAAAGCCGTGTAATTTGTCAAATCAGAAATTTGGAACCATATCACATGTCACAAAATCTCGGCCAACTAGGGAGAGAGAGTTAGCAGGTAGTCCCAGTGAAAAGGCACAAGGAATTAGAATAGAGAAATCTTCTTCCTTTACGGTTCCATTAGTATCAGATGAAGACTTTCAATCGTTTGAAACAAGACAAAAACCGCAGGTAATCAGAGTTGTGCCACATAACTCACGATCTGCAACGGTATCAGCTGCTAGAATTTTTCAGTCGATCCAAGAAGAGAGAAAACAGTATGATCTAGTCTAG 1749 0.422 MKRGKGGDGDDDDEKVGPMFPRLHVNDTTDKGGPRAPPRNKMALYEQFTVPFQRFNPNSNSSNSLPLTPSSIMGNDPKRSYMLPVRLPSQTDNHRAESYISHQSNGENLDTLSAQLEQRKKGEGHLQVSSSRQKTVMSVESILTGEFIDSPMRQTEKVLDEEDQHCSASNISRLHKGDACMPQESNDIEHSDDLLNSEGSDDLSKISTLEDLSSLKLSPDGVVQILGQQLFWKARRKITNQQRMYAVQVFELHRLIKVQQLIAGSSDLLLEDAAILEKFPLQESTPKSLSLEVVVEPQTQNHKQQDHSENLNRKSECSAENGVEKTSFTYQSYGSHLSNYAPFPGNPQQENVGSQGFNQSPGHQWLIPVMSPSEGLVYKPVLPGPGFNGAVYGGCGPFGQGPPDGTVMNPAYGVPNFHQAITVSPFIPPSSYAYFTPHGMPAAMNQSASGSVVEQASQFVAHGSHDQNSNSSLVGADFGTHNQKPCNLSNQKFGTISHVTKSRPTRERELAGSPSEKAQGIRIEKSSSFTVPLVSDEDFQSFETRQKPQVIRVVPHNSRSATVSAARIFQSIQEERKQYDLV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00468 582 MobiDBLite consensus disorder prediction 500 519 - -
Trre1g00468 582 MobiDBLite consensus disorder prediction 302 319 - -
Trre1g00468 582 MobiDBLite consensus disorder prediction 1 20 - -
Trre1g00468 582 MobiDBLite consensus disorder prediction 1 38 - -
Trre1g00468 582 MobiDBLite consensus disorder prediction 180 196 - -
Trre1g00468 582 MobiDBLite consensus disorder prediction 297 319 - -
Trre1g00468 582 MobiDBLite consensus disorder prediction 175 196 - -
Trre1g00468 582 PANTHER PROTEIN EARLY FLOWERING 3 162 580 IPR039319 GO:2000028
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00468 Trre-Chr1 3521762 3525714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00468 K12125 - gmx:100818279 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00468 1 3521762 3525714 Trre1g00468 1 3521762 3525714 ECH