Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00454 ATGGACATTGTTGCTCTTTTAACTTCTGCTGGAATTAATATTGCTGTATGTCTGGTTCTCTTTTCACTTTATTCTATATTAAGAAAACAGCCCAGCAATGTTAATGTGTACTTTGGACGGAGACTAGCATCTCAGCATTCAAGACACATTGATTTCTGGCTGGAAAGATTTGTTCCCTCTCCTGGCTGGATATTAAAAGCATGGGAACCATCGGAGAGTGAGATATTGGCTATTGGTGGCTTGGATGCTGTAGTTTTCGTAAGGATAGTTTTGTTCAGTATTCGAGTTTTTTTCATTGCTGCTGTCATCTGCACTGTTCTAGTGCTTCCTGTGAATTACTACGGTACATACTGGGTGGTGGATAAGAAAACTCAAAGAACGTCACTGGAAGTATTTACCATTGAGAATGTCAAAGAAGGTTCAACATGGCTTTGGGCTCATTGTCTTGCATTATACATCATAACACTTGCAGCCTGCACTCTTCTATACTTTGAATTCAAGAAAATTACTAAGTTGAGGCTACAGCATATTAGTGAATCTCCTCCAAGTCCAAGTCATTTTACCATTCTTGTCCGATCAATTCCCTGGTCAGCAGACGAATCGTACTGTGACACAGTAAACAAATTCTTCTCATATTACCACGCATCAACATATTTGTCTCACCAAATGATTTATAAGTCTGGCAGAGTTCAGAAACTGAAGGACGATGCTGAACAAATGTGCAAGGTATTTAGAGATGCTTCAATGGAAAAGTCTTGTAAGCCAAGTTTTGTGCCATGTTGCTGTTTGGGATCCACAGATTCTTTTAAGTTGGGTTCTAATGAGATGGGTAGTATTCATGATAAAACATGCTACACTGACATAGATGCGGCAAGGAAAAAGGAATGCCCATCTGCTTTTGTGTTCTTTAAAACTCGGTATGGTGCTCATATGGCTGCACAAACTATGCAAACATCAAATCCTATGGTATGGGTGACAGAAACAGCTCCTGAACCACATGATGTTCACTGGTCCCACATTCGTATACCATATAAGCAAATTTGGATCCGTAAGATGGCTACGTTTGTGGCTTCGATTGCCTTCATGCTGGTGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAACTAGAAAAGCTTCAGAAAATGTTCCCCTTTTTGACTGGGGTACTTACAAACCAATATGTGAAACAGGTGGTGATTGGTTACCTACCAAGTGTGATATTGGTTTTATTTTTGTGTGCCGTTCCACCTGTGATGATACTATTTTCAACAGTTGAGGGTTCTATTTCCCGCAGTGGACGGAAGAAAAGTGCATGTTGGAAAGTTTTGTACTTCACAATCTGGAATGTGTTTTTTGTTAATGTTTTTACCGGTTCCCTTATCAATCAAATTTTAGTCTTTTCTAGCTTAAAAGACCTGCCTGCACAACTTGCGAAGGCAGTGCCCTCTCAGGCTACCTTCTTCACGACTTATGTTTTGTCATCTGGTTGGGCAAGTTTGGGATTTGAACTTCTGCAAATTTGTCCTCTTTTATACAATCTATTCCAGAGATTTCTACTCAGGGTTAAGGATGATACACTTAGTGGCATTTCTTTTCCATACCATACAGAAGTCCCAAGGCTATTACTGTTTGGATTTCTTGGGTTCACCTGTTCTATTCTGGCACCTCTAATGCTTCCATTCTTAGTGGTCTACTTTTTTCTTGCGTACCTTGTTTACCGAAACCAGATTCTTAACGTGTACATTACAAAATACGACAGTGGGGGACAATACTGGCCTATTGCACACAACACAACGGTCTTCTCTTTGCTAGTTGCTCAACTTATCGCACTTGGGGTGTTTGGACTAAAACGCTCTCCAGTTGCATCTGGATTTACCATTCCCTTGATCATTGTTACCATTCTTTTTCACCAGTATTGTAGGCAACGATTTATCCCCGTATTTAAATGCAATTCAGCACAGATTCTTATTGATATGGATAAGAAAGATGAACAATGTGGAAAGTTGGAAGAGATTTATGAACAATTACGATCAGCCTACCACCAACCCATGTTAGTGCCGCTTGTCCCGAGCCCATCCGAATGCCCCAGCCCACAAGAGGACAAGCGGTTTATTGAGAGTTCAGTAGATATTGAGAAAGGCAAAGAAGTTGGTCAAGAACATAGACTGGGGCCTATCCATCGCACGGTGAGTTCGAGCTCGGATAAATTGGTACTTGGTGGAAATCAAATGAGCGATCCGGCTTGTACATTGAATAAGAATATTCCTAATGTGTCTGATCCAGTGCATCAACATCTAATTAATGATGGATTATGA 2322 0.4048 MDIVALLTSAGINIAVCLVLFSLYSILRKQPSNVNVYFGRRLASQHSRHIDFWLERFVPSPGWILKAWEPSESEILAIGGLDAVVFVRIVLFSIRVFFIAAVICTVLVLPVNYYGTYWVVDKKTQRTSLEVFTIENVKEGSTWLWAHCLALYIITLAACTLLYFEFKKITKLRLQHISESPPSPSHFTILVRSIPWSADESYCDTVNKFFSYYHASTYLSHQMIYKSGRVQKLKDDAEQMCKVFRDASMEKSCKPSFVPCCCLGSTDSFKLGSNEMGSIHDKTCYTDIDAARKKECPSAFVFFKTRYGAHMAAQTMQTSNPMVWVTETAPEPHDVHWSHIRIPYKQIWIRKMATFVASIAFMLVFLIPVTFVQGLTQLEKLQKMFPFLTGVLTNQYVKQVVIGYLPSVILVLFLCAVPPVMILFSTVEGSISRSGRKKSACWKVLYFTIWNVFFVNVFTGSLINQILVFSSLKDLPAQLAKAVPSQATFFTTYVLSSGWASLGFELLQICPLLYNLFQRFLLRVKDDTLSGISFPYHTEVPRLLLFGFLGFTCSILAPLMLPFLVVYFFLAYLVYRNQILNVYITKYDSGGQYWPIAHNTTVFSLLVAQLIALGVFGLKRSPVASGFTIPLIIVTILFHQYCRQRFIPVFKCNSAQILIDMDKKDEQCGKLEEIYEQLRSAYHQPMLVPLVPSPSECPSPQEDKRFIESSVDIEKGKEVGQEHRLGPIHRTVSSSSDKLVLGGNQMSDPACTLNKNIPNVSDPVHQHLINDGL 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00454 773 Coils Coil 661 681 - -
Trre1g00454 773 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 5 689 IPR045122 GO:0005227
Trre1g00454 773 Pfam Late exocytosis, associated with Golgi transport 6 165 IPR032880 -
Trre1g00454 773 Pfam Cytosolic domain of 10TM putative phosphate transporter 186 339 IPR027815 -
Trre1g00454 773 Pfam Calcium-dependent channel, 7TM region, putative phosphate 350 616 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00454 Trre-Chr1 3368322 3376443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00454 K21989 - gmx:100796574 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00454 1 3368322 3376443 Trre1g00454 1 3368322 3376443 ECH
Trre1g00454 1 3368322 3376443 Trre5g04962 5 51315219 51320399 PCT