Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00453 ATGTCAAGAAGACCGGGTAATCCTTCTAGAAGATTCGGTGATGGCAAATCGAAATCTTCACCACTTTTGTCGATTGGTCTTATAGTTGTGGGAGCTTTGTTTATCGTTGGTTACGTGTACAGGGGCTCAGGTGGAGTTGGAAGCCGTTTAGATTCTGTTAGCCGGGTTGAAGGTGATTATTTGTGCAGTGGAGAGGTCCAACGGGCAATTCCTATTTTACAGAAAGCATATGGAGATAGCATGCATAGAGTTTTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGCAAAAGGAGGATGAAACTGAAGCCTGGGGTATAGAGCCGTATGATATAGAGGATGCCGATAGTAATTGCAAATCACTAATCCGTAGAGGCAATGTGCGTGTCGCTGATATCAAGTTTCCTCTTCCATATAGGCCAAAATCTTTCTCGCTTGTAATTGTTTCAGATACTCTCGATTATCTATCTCCCAGATACCTCAATAAAACTCTTCCAGATTTGGTGAGGGTATCATCTGATGGTTTAGTGATATTTACTGGTTTTCCGACTAATCAAAAGGCCAAGGTAGCAGATGTTTCTAAATTTGGAAGAGCGGCCAAGATGAGGAGTGGATCCTGGTGGGTCAAGTTTTTCCTTCAGAACAACTTAGAGGAGAATGAAGCTATTAATAAGAAGTTTGAGCAAGCTTCAACACAGAGTTCATTTGTTCCAAAATGCCAGATATTCCACTTGAAGTCACTCCATTGA 756 0.4167 MSRRPGNPSRRFGDGKSKSSPLLSIGLIVVGALFIVGYVYRGSGGVGSRLDSVSRVEGDYLCSGEVQRAIPILQKAYGDSMHRVLHVGPDTCYVVSKLQKEDETEAWGIEPYDIEDADSNCKSLIRRGNVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPDLVRVSSDGLVIFTGFPTNQKAKVADVSKFGRAAKMRSGSWWVKFFLQNNLEENEAINKKFEQASTQSSFVPKCQIFHLKSLH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00453 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 187 IPR029063 -
Trre1g00453 251 Gene3D Vaccinia Virus protein VP39 60 250 IPR029063 -
Trre1g00453 251 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 251 IPR044689 GO:0008168|GO:0045488
Trre1g00453 251 Coils Coil 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00453 Trre-Chr1 3358400 3361482 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00453 K23871 - gmx:100796049 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00453 1 3358400 3361482 Trre1g00453 1 3358400 3361482 ECH