Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00451 ATGAAAGAAGATGAAGGTGATGATAAGAAAATCAGCGAAGAGAAAATTCAAGATATTAAGCTTTGGGGAATTTTCCTCTTCGGTTTAATTGGCGCTACCGCCACCAGTTTCGCCCTGTCCAGGTCGAAAGTCAGTTCTTTTCGATCAGCTTTTCAAGAAGAAGCTTGGAAGAGGTACAATAAGCGATTGCAAGAAGAGTATGAGGAAGAGATGGAAAGAGTCGAAAGAATAAGGCGTATGCAAAATGTGTTTAATAAAGAAAGAAATAAGTTTAGGAAAAATTACGAGAATTGGAAGGAAAGTGGTTCTGGTTCATATCATCAGCATTTCCAAAGAGATGATTGGTATTATAAGGCTGAACAAACCTTCAGAGACCAATGGAACCATTACCGAGACACCCCAAGGGAAAACGGAAGGATAAATAATTCATTATTATCACACCACTACTCGGTTTTGGGTCTTGACAGGTCCAGAACAACACCATATACAGATGCTGAGATTAAGACCGCATTTAGGACCAAAGCAAAGCAGTATCATCCTGACCAGAACCAGGAGGATAGAGTGGCTGCTGAGGCTAAATTCAAAGAAGTAATGGGTTCATATGAGGCCATACAACAACAAAGAAAGAATCATAGTCTGTAA 642 0.3972 MKEDEGDDKKISEEKIQDIKLWGIFLFGLIGATATSFALSRSKVSSFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQNVFNKERNKFRKNYENWKESGSGSYHQHFQRDDWYYKAEQTFRDQWNHYRDTPRENGRINNSLLSHHYSVLGLDRSRTTPYTDAEIKTAFRTKAKQYHPDQNQEDRVAAEAKFKEVMGSYEAIQQQRKNHSL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00451 213 PRINTS DnaJ domain signature 171 186 IPR001623 -
Trre1g00451 213 PRINTS DnaJ domain signature 149 167 IPR001623 -
Trre1g00451 213 PRINTS DnaJ domain signature 189 209 IPR001623 -
Trre1g00451 213 SUPERFAMILY Chaperone J-domain 147 209 IPR036869 -
Trre1g00451 213 Gene3D DnaJ domain 120 212 IPR036869 -
Trre1g00451 213 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 42 211 - -
Trre1g00451 213 Pfam DnaJ domain 148 209 IPR001623 -
Trre1g00451 213 Coils Coil 53 80 - -
Trre1g00451 213 CDD DnaJ 148 197 IPR001623 -
Trre1g00451 213 ProSiteProfiles dnaJ domain profile. 147 209 IPR001623 -
Trre1g00451 213 SMART dnaj_3 146 209 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00451 Trre-Chr1 3353377 3355989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00451 - - gmx:100804936 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00451 1 3353377 3355989 Trre1g00451 1 3353377 3355989 ECH