Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03485 ATGATTACATCAACTGTAAAGAAGAATAAGAACACTACTACAGCTTTGTGTTTTGAAGACACCAAAGAAAGAATCAAGAGCATGTTCAACAAAGTTGAACTTTCAATTTCTTCATATGATACAGCTTTTGTGGCAATGATTCCTTCTTCAGCGTCGCCAAACACCCCCTTTTTCCCACAGTGCTTGAATTGGTTATTGGATAATCAACTCTTGGATGGCTCCTGGGGTCTTCCCGATCGTCATCCATTGTTGATGAATGATGCTCTCTTGTCTACCTTAGCATGTATCCTTGCATTAAAGCAATGGGATATTGGTGAAGATAAGATGAATAAGGGAATTCAATTTATTGAGTCAAACCTTACTTCAATCAATGATGACAAGCAACACCGTCCCATAGGATTTGATATACTTTTTCCTTCTTTGATTGAATATGCACAAACTTTGGGAATTAATCTTCCAATTGGAGCTACAAGCTTGGAAGCAATTATCCAGAAGAAAGACAAAGAACTCCAAAGAGGTTTTGAAAGTAATTCAGAAGGGTGGAAAGCATATATAGCGTATGTATCTGAAGGAATGTCGAACTCATTGGACTTGAATACAATCAACAAGTATCAAAGAAAGAATGGATCTTTGTTTAATTCACCTGCTACAACAGCAGCTGTTTTTCAGCACTTAAACAATGCTGACTGTCTTAGTTACCTCCAATCAGTATTACAAAAGTTTGGTAATGCAGTTCCAACGGTTTATCCTGTGGATATATATGCGCGCCTCCATATGATTGATAGTCTTGAAAGATTGGGTATTAATCATCATTTCAAAGATGAAATTCGAAGTGTATTGGATGAAACATACAGATATTGGCTGCAAGGAGCGGAAGATATATTTTTAGATCCCACAACGTGTGCAATGGCATTTCGAATGTTGCGTCTTAATGGTTATGATGTATCTTCAGATCCATTTTATCAATATTCAGAAGATAAATTTGCCAATTCCTTGAAAGGGTATTTGAAAGATGTTGGTGCTGTTTTAGAGCTATATAGGGCTTCACAAGTCATTATACATCCTGATGAATCAGTTTTGGTTAAACAAAGTTCTTGGACAAGAAATCTTCTGAAGCACGATTCTTCCCCTTACCAATTATATGCTGATAAACTTCGTATTTATGTTGATAATGAGGTCAATGATGTTCTTAACTTTCCACATCATGCGAATTTGGAGCGTTTGTTAAACAGGAGATCAGTGGAGCATTACAATGCAGACGAAACAAGGATCTTAAAAACATCATACAGATCTTGCAATCTTGCAAACCAAGACATTCTGAAGCTAGCAGTAGAAGACTTCAATCTATGCCAATCAATACACAGTAACGAATTGAAACAACTTGGAAGGTGGATTGTTGAAAGCAGACTAGATAAACTAGAATTTGCAAGGCAGAAATTGGCATATTGTTACTTCTCCGGTGCAGCTACTCTTTTTGCCCCCGAACTTTCTGATGCTCGCATATCTTGGGCGAAGAACGGGGTGCTCACAACAGTTGTGGATGATTTCTTTGATGTCGGGAGTTCTCAAGAAGAGCAAGAGAATCTTATTCAACTAGTTGAAAAGTGGGATGTAGATGTCAATACTGTTTTTTGTTCTGAAGCGGTTAAGATAATATTTTCTGCAATTCGTAGCACAATTTGTGAGATTGGAGAGAAATCTGTCGAGCGGCAAGGACGCAATGTGAAAGGCAATGTTATCAAGATTTGGTTAGATTTGATGCGGTCTATGTTTACAGAAGCCGAGTGGTTGAGAACCAAGGCCACCCCAACAATTGATGATTATATGCAAAATGCATTCGTATCATTTGCCTTAGGACCAATTGTTCTTCCAGCACTCTATCTTGTTGGACCTAAGCTTTCAGACGATGTTGCAGAAAATCAGGAACTGAACTATCTCTTCAAGACAATGAGCACTTGCGGACGTCTTCTCAATGATATTCAAGGTTTTAAGAGAGAATCCGAGGAAGGGAAGTTGAATGCCGTGAGTTTGCATATGCTTCATGGTAATGGAGTTGTTACTTACGAAGACACCATTGATAAGTTAAAGGGTGTTATTGAGGATAAGAGAAGAGAACTGCTGAGATTGGTTTTGAAGGAAAAAGGAAGCTTAGTTCCAAGAGATTGCAAGGATTTGTTTTGGAAAATGATGAAAGTGTTGAATCTATTTTACATGAAAGATGATGGATTTACTTCAAATGAGATGATGTACTCTACTGTTAATGCAGTACTTAAAGATCCAATCATTCTTAATTAA 2295 0.3752 MITSTVKKNKNTTTALCFEDTKERIKSMFNKVELSISSYDTAFVAMIPSSASPNTPFFPQCLNWLLDNQLLDGSWGLPDRHPLLMNDALLSTLACILALKQWDIGEDKMNKGIQFIESNLTSINDDKQHRPIGFDILFPSLIEYAQTLGINLPIGATSLEAIIQKKDKELQRGFESNSEGWKAYIAYVSEGMSNSLDLNTINKYQRKNGSLFNSPATTAAVFQHLNNADCLSYLQSVLQKFGNAVPTVYPVDIYARLHMIDSLERLGINHHFKDEIRSVLDETYRYWLQGAEDIFLDPTTCAMAFRMLRLNGYDVSSDPFYQYSEDKFANSLKGYLKDVGAVLELYRASQVIIHPDESVLVKQSSWTRNLLKHDSSPYQLYADKLRIYVDNEVNDVLNFPHHANLERLLNRRSVEHYNADETRILKTSYRSCNLANQDILKLAVEDFNLCQSIHSNELKQLGRWIVESRLDKLEFARQKLAYCYFSGAATLFAPELSDARISWAKNGVLTTVVDDFFDVGSSQEEQENLIQLVEKWDVDVNTVFCSEAVKIIFSAIRSTICEIGEKSVERQGRNVKGNVIKIWLDLMRSMFTEAEWLRTKATPTIDDYMQNAFVSFALGPIVLPALYLVGPKLSDDVAENQELNYLFKTMSTCGRLLNDIQGFKRESEEGKLNAVSLHMLHGNGVVTYEDTIDKLKGVIEDKRRELLRLVLKEKGSLVPRDCKDLFWKMMKVLNLFYMKDDGFTSNEMMYSTVNAVLKDPIILN 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03485 764 FunFam cis-abienol synthase, chloroplastic 35 238 - -
Trre11g03485 764 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 207 421 IPR008930 -
Trre11g03485 764 FunFam Ent-copalyl diphosphate synthase, chloroplastic 230 447 - -
Trre11g03485 764 SUPERFAMILY Terpenoid synthases 436 761 IPR008949 -
Trre11g03485 764 Gene3D - 35 238 - -
Trre11g03485 764 Coils Coil 685 705 - -
Trre11g03485 764 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 18 760 - -
Trre11g03485 764 FunFam Ent-kaur-16-ene synthase, chloroplastic 450 763 - -
Trre11g03485 764 SFLD Terpene Cyclase Like 1 N-term 2 430 - -
Trre11g03485 764 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 39 225 IPR008930 -
Trre11g03485 764 Pfam Terpene synthase family, metal binding domain 440 705 IPR005630 GO:0000287|GO:0010333|GO:0016829
Trre11g03485 764 Gene3D Farnesyl Diphosphate Synthase 450 764 IPR008949 -
Trre11g03485 764 Pfam Terpene synthase, N-terminal domain 202 378 IPR001906 GO:0010333|GO:0016829
Trre11g03485 764 CDD Terpene_cyclase_plant_C1 247 760 IPR044814 GO:0010333|GO:0016102
Trre11g03485 764 Gene3D - 26 447 IPR036965 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03485 Trre-Chr11 47490037 47495523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03485 K04121 - gmx:100793849 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03485 11 47490037 47495523 Trre11g03485 11 47490037 47495523 ECH