Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3117 ATGGGACACAGTTCAAACAGCAAGAAGAAATCTCCCAACAGCGACAAGTATGCTTTGATTCAAGATAACTTCACTTCCCTCGAACAGGTTATTGCTGCCCTGGGGAAATATGGTTTAGAATCATCAAATCTCATCCTTGGAATTGATTTCACAAAGAGTAATGAATGGACAGGCCAAAACTCATTCAATAGGAGAAGCCTTCATGCAATTGGAAATACACCCAACCCCTATGAGAAGGCCATCTCAATTGTTGGCAAGACTTTGGCTCCCTTTGGTCATGATAACTTGATTCCATGCTTTGGCTTTGGTGATTTTACCACACATGATCAAGAAGTATTCAGCTTTCATAGTGATCATTCACCTTGCCATGGCTTTGAGGAAGTTTTGGCTTGCTACAAAAAAATTGTTCCAAACTTGAAACTCTCAGGACCAACTTCTTATGCTCCTGTGATTGAAGCTGCCATAGACATAGTTGAGAAAAGTCATGGCCAATTCCACGTGTTGGTTATCATTGCAGATGGTCAGGTAACAAGAAGTGTAGATTATGATGATAAGGAACTCAGTCCCCAAGAAGAGAAAACAATCAAAGCAATTGCTGAAGCAAGTAAATATCCACTTGCTATAGTCCTGGTTGGAGTTGGCGATGGACCATGGGAAGACATGGAAAAGTTTGATGACAAAATTCCAGCACGCGATTTTGATAATTTTCAGTTTGTTAATTTCACGGAGATCATGTCTAAATCCACAAGCCCCGACGAGAAAGAAGCAGCTTTTGCACTGGCTGCTCTCATGGAGATTCCCTTCCAATACAAGGCATGTGTTGAATTTCAAAAACTTGGACGTGTAAGAGGAAGAGCAAGTAGAATAGTTCCTAAACCTTCACCTGTTGAGCCAGCAGCAACCACAGATGCGCAAAATTAA 921 0.4126 MGHSSNSKKKSPNSDKYALIQDNFTSLEQVIAALGKYGLESSNLILGIDFTKSNEWTGQNSFNRRSLHAIGNTPNPYEKAISIVGKTLAPFGHDNLIPCFGFGDFTTHDQEVFSFHSDHSPCHGFEEVLACYKKIVPNLKLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQVTRSVDYDDKELSPQEEKTIKAIAEASKYPLAIVLVGVGDGPWEDMEKFDDKIPARDFDNFQFVNFTEIMSKSTSPDEKEAAFALAALMEIPFQYKACVEFQKLGRVRGRASRIVPKPSPVEPAATTDAQN* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3117 306 PANTHER UBIQUITIN-PROTEIN LIGASE RGLG2-LIKE PROTEIN, PUTATIVE-RELATED 3 297 - -
Tpr7g3117 306 PANTHER COPINE FAMILY PROTEIN 1 3 297 - -
Tpr7g3117 306 SUPERFAMILY vWA-like 42 225 IPR036465 -
Tpr7g3117 306 Gene3D von Willebrand factor, type A domain 39 255 IPR036465 -
Tpr7g3117 306 SMART VWA_4 41 244 IPR002035 -
Tpr7g3117 306 MobiDBLite consensus disorder prediction 287 306 - -
Tpr7g3117 306 Pfam Copine 66 280 IPR010734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3117 Tpr-Chr7 38626398 38630732 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3117 K16280 - gmx:100790153 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3117 7 38626398 38630732 Tpr7g1453 7 16074220 16081082 PCT