Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3112 ATGCCGAAAGAAACAACAAAATTCTCCCGCAAACTAAAGGAGAAGATGAAAACACCCGCCAACAAAAAAACCGTTTCTTCCGCTCACACTTCTTCTTCATATCAACAACTTCAATCTCACTCTCGTCGTCTCGGTATGAAAACACCGCCTCCTGCCGTTCTCAGGGCGCGTGCCGCCGTTTGGCGCATCCAACAAAGCCTCTTTCCACAGCAACATAAACTACGTGTGACGGACTCGGAGTTACCACATCCTAAATATGAAATGCCAGACGACTTCTCCACTGATCAATCCGATGATTGGCTTCGATGTCCGGTTTGTCTGGCTGTCGTTAACGTATCAAATAACCGCTCGAAGTACTGTTGTCCTAACTGTTCCGTTCACCTTGATGATAGTGATGATGGTGAAGAAGATGTTAACGAGCTGGTTAAAGAAGTAGAACAGGATGAAGCTGACTGTGGTATGCCTGGAGAAACATTTACAGATTATCGGCCATCAAAGCTATCTATCGGACCTCCCCACCCAGATCCAGTTGTGGAAACATCTTCCTTGTCTGTAGTAGAGCCACCCGAGCCTACTTATGTTCCAAAGATTAAGGATGAGTTGGAATTTTTCAAGAGTTTGTCATGCTTGCAGATTGAGACTTTGGTCTATGCTTGTCAGAGACATCTCCAACACATTCGCAACGGTGCTAGGGCTGGATTCTTTATTGGAGATGGAGCAGGTGTAGGTAAAGGTCGAACAGTCGCTGGGCTAATCTGGGAGAACTGGCACCATGGGAGGAAGAAAGCCTTGTGGATTTCTATTGGTTCAGACTTGAAGTTTGACGCCAGAAGAGATTTGGATGATATGGGTGCAAGTTGCATTGAAGTGCATGCTTTGAACAAACTGCCTTATACTAAGCTTGACTCGGACACTGTTGGAGTTAGGGAGGGAGTTATTTTCTTGACATACAGTAGCCTGATAGCATCATCTAGCAAAGGTCGTTCCCGTCTGCAACAGCTTGTACAGTGGTGTGGAACTGGGTTTGATGGTCTTATAATTTTTGATGAGTGTCATAAAGCAAAAAATTTGGTTCCCGAAACGGGTATGGATTCAACAAAAACTGGTCAAGCTGTACGTGATATCCAGGCTCAACTACCTGAAGCTCGTGTTGTTTATTGTTCAGCTACTGGAGCATCTGAACCTCGCAATATGGCTTATATGGTTCGACTTGGCCTTTGGGGAGAAGGGACTGATTTTAGTGATTTTTATGACTTTCTAGAGGCTCTTGAAAAAGGGGGTGTTGGAGCTCTAGAGCTAGTTGCAATGGACTTGAAAGCAAGGGGCATGTATTTATGTCGTACGCTTAGCTACAAGGGTGCTGAGTTTGATATTATAGAAGCAAGATTAGAAGATAAAATGATGGATGTGTATAAAAAGGCTACAGAAGTTTGGGTGGATTTGCGTAATAATTTTATATCTTTAAAAGTAGAGAATCCAAGACTAATATGGAGATTATACTGGGCAGCGCACCAGCGCTTCTTTAGACACTTGTGTATGTCTGCTAAAGTCCCTACTGTAGTGAGACTGGTGAACCAAGCATTAATGGAAGACAAGTGTGTAGTCATAGGTCTGCAGAGTACCGGGGAAGCAAGGACAGAGGATGCTGTTTTAAAATACGGCTCTGAACTTGATGACTTTATTTCTGGACCTCGTGAGTTAATGCTAAAATTTGTTGAAGATTATTACCCAGATGATATCTCATGGCCGAAAAAGCCTGAAGTTCTCCCAGATGATGGTCTCGGAAGTCTTGGAAGGAAGAGGCACTTTGCAGGTCCTGCCGTTTCAGCAAAATCTAGAGTCAGTAAAGTAGCTAAATTGGAGCCTCCTAGTGATGCTGAAAGTGACGAAGAATGTGGAACTGTCTCTGATTCTGATTACGGACCAGAAGAGGATGAAAGTGGTTCAGAAGAGGATGAAAGTGCTGCCGACTCTGATTATGATGAGTTTCAGAAATGTGAAATTAGCATTAAAGAAGAGGAAAGGGAAAACTTGTTGCAGTGTTCCCGCTGTGGAAAATACGCTCATCAGTCAGGCTTGGTGCCCCCAATTCGCGATTTTACTCTTGAGGAATGGACATGTAGTTTGTGCAAGGATAAAACTGTCGAATATCCTCCTCCTGGAACAAACAAAATTAAACTCCCAAAGAGTTTTGGCACACCCATCGAGTGCAAGAGAGAAATATTAGAGAGGATTCATGCTTTGGATCTTCCAAACAATCCTTTGGATGAAATTATTGACCAGTTAGGAGGCCAAGACATAGTTGCAGAAATTACAGGAAGGAAGGGAAGGCTTGTGAGAGACCCTAGTGGACAGGGTGTGGTTTATGAGCCTCGAAATACAAGAGATGTCACTGCCGAAATGGTCAACATGCATGAAAAAATGCTCTTCATGGAAGGTAAGAAGTTAGTCGCTATCATCTCTGAAGCTGGATCAGCTGGCGTTTCCTTGCAGGCAGACAGAAGAGTGAGAAATCAGAAAAGAAGGGTTCATATAACACTAGAACTTCCATGGAGTGCCGACCGAGCAGTTCAGCAGTTTGGAAGAACTCATAGATCAAATCAAGTCTCAGCACCACAATACAGATTACTATTCTCAGACCTTGGTGGAGAACGCCGATTTGCATCAACTGTTGCTATGAGATTAGAATCCCTTGGGGCTTTGACTCAGGGGGACCGCAGGGCTGGACCTTCATTAAGTGCATATAATTATGAGAATGATTATGGAAAGAGGGCTCTGGAGAATTTGTACAAAGCAATAAAGGAGCAGGATCCTCCTGTTGTTGTACCTCCAGGATGCTTATCTGACAGTCCAGATACAATCAAAGATTTTAATGGGCAGGCTACAGTTGCTCTTGATTCTGTTGGAATTTCTATGGAAACCACTGGAAACTCTAAAAAAAGCAACCAAAATAAAAAAGCTATTCGACGATTTCTCAACCGGATTTTGGGCATAGCTCCTGAGATTCAGAATAGGCTATTTGAGTTATTTGTGAATAACTTGGATCTTCTTGTTCAAAAAGCTCGCATTGAAGGTAGCCTTGACAGAGGCATTGTTCACTTGAAAGCTAATGTCATTGAACTGCAAGGGACTCCAAAGACAGTCTATGTTGATCAAATGAGTGGGGCTTCAACTGTTTTGTTCACATTCTCCTTGGATCGTGGAGTTTCATGGGAGTTGGCGAACACCATGTTGAAAGGGAAGCTGAAATCTGAATTTGGTTCATCTGATGACGGCTTCTACCTGTCCAAGAGTGAGTTTATGGGAAAACGTCATGTTATTTTAGCTTTTGAAAGTTCTGCTTCAGCTATGTATAAGATAGTTCGTCCCACCACCGGAGAATCACCTCGGGATATGCATCGGGCAGAATTAACTAAAAAATATTCAAAAGTTTCATCTTTAGAGGCGGCCAAAATTCGTTGGGAACACGATTATGAAGCATCATCTAAACAGTGCATGCATGGTCCGAATTGTAAGAATGGTAAATCATGTTCAGTTGGCTCAAGACTACAAGAAGTAAATGTCTTATGTGGTGTCATTGTTCCTATTTGGGGAAAAATACAAACGGCTCTTTCTAAGCAGGTCAAACAATTTCACAGGAGGATACGCATTGTTTGCGTTGAAACTACATCATCAGATAACAGACGTATAGTTGGGCTTCTTGTACCTAATGCAGCAGTTACAACTGTGCTTGAAGGTTTAACAACACAGCCACAGTTTATAGTACTGGATGATTGA 3777 0.4281 MPKETTKFSRKLKEKMKTPANKKTVSSAHTSSSYQQLQSHSRRLGMKTPPPAVLRARAAVWRIQQSLFPQQHKLRVTDSELPHPKYEMPDDFSTDQSDDWLRCPVCLAVVNVSNNRSKYCCPNCSVHLDDSDDGEEDVNELVKEVEQDEADCGMPGETFTDYRPSKLSIGPPHPDPVVETSSLSVVEPPEPTYVPKIKDELEFFKSLSCLQIETLVYACQRHLQHIRNGARAGFFIGDGAGVGKGRTVAGLIWENWHHGRKKALWISIGSDLKFDARRDLDDMGASCIEVHALNKLPYTKLDSDTVGVREGVIFLTYSSLIASSSKGRSRLQQLVQWCGTGFDGLIIFDECHKAKNLVPETGMDSTKTGQAVRDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGEGTDFSDFYDFLEALEKGGVGALELVAMDLKARGMYLCRTLSYKGAEFDIIEARLEDKMMDVYKKATEVWVDLRNNFISLKVENPRLIWRLYWAAHQRFFRHLCMSAKVPTVVRLVNQALMEDKCVVIGLQSTGEARTEDAVLKYGSELDDFISGPRELMLKFVEDYYPDDISWPKKPEVLPDDGLGSLGRKRHFAGPAVSAKSRVSKVAKLEPPSDAESDEECGTVSDSDYGPEEDESGSEEDESAADSDYDEFQKCEISIKEEERENLLQCSRCGKYAHQSGLVPPIRDFTLEEWTCSLCKDKTVEYPPPGTNKIKLPKSFGTPIECKREILERIHALDLPNNPLDEIIDQLGGQDIVAEITGRKGRLVRDPSGQGVVYEPRNTRDVTAEMVNMHEKMLFMEGKKLVAIISEAGSAGVSLQADRRVRNQKRRVHITLELPWSADRAVQQFGRTHRSNQVSAPQYRLLFSDLGGERRFASTVAMRLESLGALTQGDRRAGPSLSAYNYENDYGKRALENLYKAIKEQDPPVVVPPGCLSDSPDTIKDFNGQATVALDSVGISMETTGNSKKSNQNKKAIRRFLNRILGIAPEIQNRLFELFVNNLDLLVQKARIEGSLDRGIVHLKANVIELQGTPKTVYVDQMSGASTVLFTFSLDRGVSWELANTMLKGKLKSEFGSSDDGFYLSKSEFMGKRHVILAFESSASAMYKIVRPTTGESPRDMHRAELTKKYSKVSSLEAAKIRWEHDYEASSKQCMHGPNCKNGKSCSVGSRLQEVNVLCGVIVPIWGKIQTALSKQVKQFHRRIRIVCVETTSSDNRRIVGLLVPNAAVTTVLEGLTTQPQFIVLDD* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3112 1258 MobiDBLite consensus disorder prediction 627 658 - -
Tpr7g3112 1258 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g3112 1258 MobiDBLite consensus disorder prediction 1 47 - -
Tpr7g3112 1258 PANTHER OS08G0223700 PROTEIN 137 1248 - -
Tpr7g3112 1258 Pfam P-loop containing NTP hydrolase pore-1 172 472 IPR039187 -
Tpr7g3112 1258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 638 712 IPR013083 -
Tpr7g3112 1258 PANTHER STRAWBERRY NOTCH-RELATED 137 1248 IPR026741 GO:0006355
Tpr7g3112 1258 MobiDBLite consensus disorder prediction 21 43 - -
Tpr7g3112 1258 Pfam C-terminal domain on Strawberry notch homologue 753 1032 IPR026937 -
Tpr7g3112 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 810 920 IPR027417 -
Tpr7g3112 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 417 IPR027417 -
Tpr7g3112 1258 SUPERFAMILY FYVE/PHD zinc finger 654 713 IPR011011 -
Tpr7g3112 1258 MobiDBLite consensus disorder prediction 614 660 - -
Tpr7g3112 1258 Gene3D - 209 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3112 Tpr-Chr7 38524797 38533353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3112 - - gmx:100808670 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3112 7 38524797 38533353 Tpr7g3112 7 38524797 38533353 ECH