Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3095 ATGATTTTGCTGACTCAACAAATAGCAAAACCACTTTTCATTTTTTCATATAAATCAAAAAACCATTCATTCAATCACCATGTGCAACTTCATCAAGGTTTTACTTTCCTTAACAATTTTTCACAATTGCCCATTATGCCTATTTCCAATAGAAGATCTTTCAAGAGAAGGAATAATAATTTGAACAAATGTAGAACTTTTTCTGATGATGAATCAGGAAAATCTCCATTGCAAACTGACCCAGATAAGAAAGATGAGGAAGTGGGAGAAGGAAGTGATGGTGTGGTCGTGGGTGGACAAGGTGAGAATCCTGATCTTCAGACAATTTTTAGAAGGTTCTGGAAAGTGGCAGCTCCTTATTGGAGTTCTGATGATAAGGTTCAAGCAAGATTGCAGCTTGCTGGTGTTTTTGCTCTCACTTTGGCTACCACTGGAATTAGTGTTGGTTTCAGTTTTCTAGGGAGAGACTTCTATAATGCACTTGCCAATAAGGATCAAGAGCAATTTACAAAGCAGCTACTTTACTACTTGGGTGGCTTTGTTGGAGGAATCCCGTTTTTTGTATTGAGAGACTATGCAAGAGAAACTCTTTCATTGAGATGGAGGTCTTGGATGACGAGGTATTACATGGATCGCTACTTGAAGGATCAGACATTCTATAAAATTCAATCACAGTCAATTATTGATAATCCAGACCAGCGAATTGTTGATGATCTAAGTTCTTTCACCGGAACAGCCCTTTCTTTCTCTTTGGCACTCTTTAATGCTGCCATAGACTTGATCTCATTCAGTAACATCTTGTATGGAATATATCCTCCACTATTTGTCGTTCTTCTCGTATACTCTATTGGTGGTACAGCCATCAGTGTTTTCCTTGGAAGGGGACTGGTGACTTTAAATTTCTTGCAAGAGAAAAAAGAAGCAGACTTTCGTTATGGACTTGTACGGGTTCGTGAAAATGCTGAATCAATTGCTTTCTATGGTGGTGAAGAGAGTGAGATGCAACTTCTTCTGCAGCGCTTCAAAAGTGCTTTCGAAAATCTAACTCAATTGCTGATTTCTTCTAGAAATCTAGAGTTCTTCACCAATGGTTACCGCTATGGCATTCAAATTCTTCCTGCTGCTGTTGTTGCTCCCATGTATTTCTCTGGAAAAATCGAGTTTGGTGTCATTAACCAGTCAGTCTCTGCTTTTAATCACATCCTTGGTGACTTTTCTCTCATTGTGTACCAGTTTCAAGCTATAAGTGCTTTTTCTGCTGTCATTAATCGGTTAGGTGAATTTGACGATATTTTGGATAGAAGCAACTCTAAATCTCTCTCTGATTCTTTGGAAGACATAGATATTATTTACAAAGACTTTATAAGTTCATCTTCACTGGAATCTAATGGATCAACTCCACAAGAGAAACATGAAACATTACTGGAGGTAGAAAATTTGTTTCTGAAGACACCAAGTGATTCGACACTTATTACAGGCCTGTCATTGGCAATCAAGGCAAAAGATAATTTACTTATAACAGGACCAAGTGGAAGTGGCAAAACTTCTTTATTAAGAGTTATGGCTGGTCTATGGAAATTTGGAACTGGAAAGATCATTTACTATGTAAAAGGCGAAGACGCCGAGAAATCTATTAGTTCAGATGTGAATACAACTCCTGATATACCTGAAAACCGTGGAAAATCCATCAGCAGAAAATCCGGAATTTTTTTCCTACCTCAAAAGCCATACATGGTTTTGGGTACTCTTCGTCAACAATTACTTTATCCAACTTGGGGTGATGATGTAGTTCCCACATCAGATAGTAATAAGCAAAAAAATGTGCTTCCATTCTTGTCAAACTCAGATGATATGAATAGTGAACTTGTGAAGCCAAAAACAGATGAGCTGAAAAAGATCTTAGAGGATGTTCGTCTTGGCTACATATTGGCTCGATTCGGTTTGGATTCAACACATGAATGGTCTAGTGTTCTTTCTCTGGGAGAGCAGCAACGTCTCGCGTTTGCTCGTCTTTTGCTTTCAAAACCTCAACTTGCTCTATTGGATGAATCGACAAGCGCACTTGATGAAGCCAATGAGGCTTATTTGTACGAAAAGATTGAAGCAGCAGGCATAACATACATCAGTGTTGGTCATCGATCGACCTTATCTGAGTTCCACGACAGAATCCTACGCATATCTACAAATGATTCTGACAATGAACAGACAAATTGGCGCGTTGAACCCACTAGACGTGAATCCTCTTTAAAAGTTTAG 2256 0.3856 MILLTQQIAKPLFIFSYKSKNHSFNHHVQLHQGFTFLNNFSQLPIMPISNRRSFKRRNNNLNKCRTFSDDESGKSPLQTDPDKKDEEVGEGSDGVVVGGQGENPDLQTIFRRFWKVAAPYWSSDDKVQARLQLAGVFALTLATTGISVGFSFLGRDFYNALANKDQEQFTKQLLYYLGGFVGGIPFFVLRDYARETLSLRWRSWMTRYYMDRYLKDQTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLALFNAAIDLISFSNILYGIYPPLFVVLLVYSIGGTAISVFLGRGLVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLLISSRNLEFFTNGYRYGIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGEFDDILDRSNSKSLSDSLEDIDIIYKDFISSSSLESNGSTPQEKHETLLEVENLFLKTPSDSTLITGLSLAIKAKDNLLITGPSGSGKTSLLRVMAGLWKFGTGKIIYYVKGEDAEKSISSDVNTTPDIPENRGKSISRKSGIFFLPQKPYMVLGTLRQQLLYPTWGDDVVPTSDSNKQKNVLPFLSNSDDMNSELVKPKTDELKKILEDVRLGYILARFGLDSTHEWSSVLSLGEQQRLAFARLLLSKPQLALLDESTSALDEANEAYLYEKIEAAGITYISVGHRSTLSEFHDRILRISTNDSDNEQTNWRVEPTRRESSLKV* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3095 751 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 134 417 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3095 751 ProSitePatterns ABC transporters family signature. 658 672 IPR017871 GO:0005524
Tpr7g3095 751 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 475 751 IPR003439 GO:0005524
Tpr7g3095 751 Pfam ABC transporter 493 686 IPR003439 GO:0005524
Tpr7g3095 751 Pfam ABC transporter transmembrane region 2 125 382 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3095 751 MobiDBLite consensus disorder prediction 65 97 - -
Tpr7g3095 751 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 84 741 - -
Tpr7g3095 751 Gene3D ABC transporter type 1, transmembrane domain 101 431 IPR036640 GO:0005524|GO:0016021
Tpr7g3095 751 SMART AAA_5 500 737 IPR003593 -
Tpr7g3095 751 CDD ABCD_peroxisomal_ALDP 475 727 - -
Tpr7g3095 751 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 84 741 - -
Tpr7g3095 751 SUPERFAMILY ABC transporter transmembrane region 111 428 IPR036640 GO:0005524|GO:0016021
Tpr7g3095 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 727 IPR027417 -
Tpr7g3095 751 MobiDBLite consensus disorder prediction 65 91 - -
Tpr7g3095 751 Gene3D - 467 738 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3095 Tpr-Chr7 38282102 38289815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3095 105 749 Acyl Lipid Metabolism Gene Families AT1G54350 69.231 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3095 - - lja:Lj3g3v0937780.2 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3095 7 38282102 38289815 Tpr7g3095 7 38282102 38289815 ECH