Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1545 ATGATGAGGCGGATGAAAAAGGAGATTGAGGATGAGATGTTCCACGATGGTGAGACTGAGTTACAGTTGTATGATGAGGGTTATGATGGAAGTGCCTGTGGAGTTGTTCTGAAGAAAGGGCCATGGACATCTGCTGAAGATGATATTTTGGTCAATTATGTCAAGAAGAATGGAGAGGGGAACTGGAATGCTGTTCATAAGCATACAGGCCTGCTACGTTGCGGAAAAAGTTGTCGATTGCGGTGGGCTAATCACCTAAGGCCAAATTTAAAGAAAGGGACATTTACTGCAGCAGAGGAGCAGTTGATTTGTGAGCTTCATGCAAAAATGGGAAACAAATGGGCACGCATGGCAAGCTTTTTGCCTGGTCGTACAGATAATGAGATAAAGAACTATTGGAACACTCGGATCAAGAGGCGTCACCGAGCTGGCTTGCCACTTTATCCCCCTGAAGTATGGCAACAGGTTCTTCATGGGCAAAGCACTGGTGGAATTAGCAGAATTAACGGTCGCAATAAAGTGCATCCTGATTTCTTGCAGAAAAAGTATTTTGATAAACATGATGCAATATTTGACTCTCTGAAGGATAACCACGGAATCTTACCTTATGTGCCTGAGCTTCCTGATATTTCTGCTTATGGCAATATGCTAAATGGTTTTGATTCTTCTCAGTATTGTAGTTTTGTGCCATCGACATCATCTAACCACAAACGTTTTCAAGAGTCAACAATGCCATTTCTTGATTTCAGTTATATTGACAGAAATGGTTTTTATCCATTTGATCATGTTCAGGATGATACTTTTGATAAGTTGACACAATCATTTGGGGTGCAATCACCCCTTGATCCTGGTCCCTCCTTACACAGCTCAATGTGTTACAGCCATTCAATTATGAATGACAATTCCTCTACTTCCAAGCCTTTCGAGGCTGCGAAATTGGAGCTCCCTTCACTCCAAAATTCAGAAATTGATTTAGGTAGCTGGGTTACATCTCCCCCGCCTCCTTTACTTGAGTCAATTGATGATTTCATTCAGTCTCCTGCACCAATTAGTACACTGGAGTCAGATTGTTCTTCTCCACAAAATAGCGGCCTTCTGCAATCTGTACTTTATCAACGGAAGACTCCAAGCAGTTCAAAAAACCAATATTATGACAATAGTTCAAATTCATCTACTGCAACTCCCGGTGAAAAAGAAGACAGCTCTGCTTTGAACATGTATGAGACAGAATGGGAAGACTATGCTGACCCTGTATCTCCATTTGGCGCGTCTTCTATATTGAACGAGTGCCCTGCTGTTAGTGCCAACAGAGATTCACTAGATGAACAGCCACCTGTTCATAACATTAATGGCAACATTGTAAAATTAGAGTATGTTGACCAGGTTTGGACCCCTGACAGTGAAAATCAAATCACGTCTCTGTTGAACTTTAGTCAGCCCGATTTCTTGCTTGGTTCTGATTGGTATGAGCATTACTCTGGGCATGACAAGAACCAATCCATCACTGATGCTACATCGATGTTTTTCGAAGATCAATTAGCCGCCAACTATAAACATACGCCTGCTGGAACTTCTAACCCAAGTCAGGTATGGGAGTTTGGTTCTCTTGCATGGAACAACATGCCTGCTGTCTATCAAATATCTGATCTTGGTTAA 1656 0.4197 MMRRMKKEIEDEMFHDGETELQLYDEGYDGSACGVVLKKGPWTSAEDDILVNYVKKNGEGNWNAVHKHTGLLRCGKSCRLRWANHLRPNLKKGTFTAAEEQLICELHAKMGNKWARMASFLPGRTDNEIKNYWNTRIKRRHRAGLPLYPPEVWQQVLHGQSTGGISRINGRNKVHPDFLQKKYFDKHDAIFDSLKDNHGILPYVPELPDISAYGNMLNGFDSSQYCSFVPSTSSNHKRFQESTMPFLDFSYIDRNGFYPFDHVQDDTFDKLTQSFGVQSPLDPGPSLHSSMCYSHSIMNDNSSTSKPFEAAKLELPSLQNSEIDLGSWVTSPPPPLLESIDDFIQSPAPISTLESDCSSPQNSGLLQSVLYQRKTPSSSKNQYYDNSSNSSTATPGEKEDSSALNMYETEWEDYADPVSPFGASSILNECPAVSANRDSLDEQPPVHNINGNIVKLEYVDQVWTPDSENQITSLLNFSQPDFLLGSDWYEHYSGHDKNQSITDATSMFFEDQLAANYKHTPAGTSNPSQVWEFGSLAWNNMPAVYQISDLG* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1545 551 SMART sant 38 88 IPR001005 -
Tpr7g1545 551 SMART sant 91 139 IPR001005 -
Tpr7g1545 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 86 IPR017930 -
Tpr7g1545 551 ProSiteProfiles Myb-like domain profile. 37 86 IPR001005 -
Tpr7g1545 551 MobiDBLite consensus disorder prediction 376 399 - -
Tpr7g1545 551 MobiDBLite consensus disorder prediction 376 402 - -
Tpr7g1545 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Tpr7g1545 551 Gene3D - 38 91 - -
Tpr7g1545 551 SUPERFAMILY Homeodomain-like 38 133 IPR009057 -
Tpr7g1545 551 CDD SANT 41 86 IPR001005 -
Tpr7g1545 551 Gene3D - 94 140 - -
Tpr7g1545 551 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Tpr7g1545 551 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 547 - -
Tpr7g1545 551 Pfam Myb-like DNA-binding domain 42 102 - -
Tpr7g1545 551 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 2 547 - -
Tpr7g1545 551 CDD SANT 94 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1545 Tpr-Chr7 17382031 17386316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1545 36 547 MYB Transcription Factor Family AT3G11440 41.948 4.72e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g1545 Myb_DNA-bind_6 1.7e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4803 3 52877218 52881694 Tpr7g1545 7 17382031 17386316 PCT