Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1456 ATGGCGAAAAAAGCTGTGTTGATTGGGATCAATTATCCTGGAACAAAAGCAGAGTTAAGAGGATGTGTAAACGATGTTTGGAGGATGCACAAATGCTTGATCGAACGATACGGTTTTTCTGAAAATGATATAACCGTTTTGATCGACACAGATTCATCGTACACGGAACCGACAGGAAAGAACATACGAAGTGCGCTGTCGAATTTGGTTGGATCGGCTGAGGAAGGAGATGTTTTGTTCGTTCATTACAGTGGACATGGGACACGTCTTCCTGCTGAAACTGGAGAAGATGATGATACTGGTTATGATGAATGTATCGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGAATTTGTGGATGGGGTTCCTAAAGGATGCAAGTTGACAATTGTATCCGATTCATGCCATAGTGGTGGCTTGATTGAAGAAGTTAAGGAGCAAATTGGAGAGAGCACAAAGGGAGAAGAGGAACATTCTGGATCCGGTTTTGGATTGTCAGGTTTTCTGCACAGGAAAGTGGAAGATGCTATTGAGTCAAGGGGATTTCATGTCCCTTCAGGATTGCGCAGTCATACACGCAGGGATGAAGATGAAAATGAAGATAGGGATATTGAACTCCCACATGGGGTTAAGAATAGGTCTCTACCACTTTCAACCCTCATTGATATACTTAAGCAGAAAACTGGGAAAGAAGATATAAACGTTGGTCAACTGAGACCCACACTTTTCGATGTTTTTGGGGAAGATTCTAGCCCAAAAGTGAAGAAGTTTATGAACGTTATCTTTAATAAACTTCAACATGGAGGTGGTGAAGGTGAACAAGGTGGTATACTTGGAATGGTGGGTTGTCTTGCTCAAGAGTTTCTCAAGCAAAAGCTGGATGGTAATGATGAGGGATATGCAAAACCTGCCATGGAGACAAAAGTCGGAAGTAAGCATGAAGCGTATGCTGGATCATCAAGGCGTGGTCTTCCAAGTGGTGGGATTCTAATGAGCGGCTGCCAGACAGACCAGACTTCAGCGGATGCTTGTCCTTCAGGAAATCCAGCTGGTGCTTATGGAGCTTTCAGCAATGCCATACAGACTATAATTGATGAGTCTGATGGTGCAATTACATATTCAGAGCTTGTTCACAAGGCTAGGCAGAAGCTACAGAAGGATGGTTTCACTCAAAAGCCTGGACTCTATTGCAGTGATCACCATGTTGATGAACCTTTCGTGTGCTGA 1239 0.431 MAKKAVLIGINYPGTKAELRGCVNDVWRMHKCLIERYGFSENDITVLIDTDSSYTEPTGKNIRSALSNLVGSAEEGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFKEFVDGVPKGCKLTIVSDSCHSGGLIEEVKEQIGESTKGEEEHSGSGFGLSGFLHRKVEDAIESRGFHVPSGLRSHTRRDEDENEDRDIELPHGVKNRSLPLSTLIDILKQKTGKEDINVGQLRPTLFDVFGEDSSPKVKKFMNVIFNKLQHGGGEGEQGGILGMVGCLAQEFLKQKLDGNDEGYAKPAMETKVGSKHEAYAGSSRRGLPSGGILMSGCQTDQTSADACPSGNPAGAYGAFSNAIQTIIDESDGAITYSELVHKARQKLQKDGFTQKPGLYCSDHHVDEPFVC* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1456 412 Pfam Caspase domain 3 403 - -
Tpr7g1456 412 SUPERFAMILY Caspase-like 6 129 IPR029030 -
Tpr7g1456 412 MobiDBLite consensus disorder prediction 184 213 - -
Tpr7g1456 412 PANTHER METACASPASE-5 1 412 - -
Tpr7g1456 412 PANTHER METACASPASE-4 1 412 - -
Tpr7g1456 412 MobiDBLite consensus disorder prediction 192 213 - -
Tpr7g1456 412 Gene3D - 300 411 - -
Tpr7g1456 412 Gene3D - 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1456 Tpr-Chr7 16116190 16118347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1456 - - gmx:100802658 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1456 7 16116190 16118347 Tpr7g1456 7 16116190 16118347 ECH
Tpr7g3111 7 38521903 38523596 Tpr7g1456 7 16116190 16118347 PCT