Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1455 ATGACACAACCACCGGTACCGTCTCCTCCACCGCCTCTACAACCACCACCTCCTCCACCAACCGCACCACCGTCACAACCTTCCGACGGTGTTCGTGTTCGCTGTGCCGGTTGTCGCATGATCTTAACCGTAGCGCCTGGACTGACTGAATTCGCTTGTCCGACCTGTCGAATGCCGCAGATGCTTCCGCCAGAACTCATGGCTAGGGTCCACCAAACGGCACCGTCAACTTCGCCGTTAACTCCGCCTTCACAGAATTTGCCGGCGCACGGCATTGATCCAACTAAGATTCAACTTCCTTGCGCTTCCTGTAAGGCGATTCTCAATGTTCCTCATGGTCTCTCGCGATTCTCTTGTCCTCAATGTAAAGTTGACCTCGCCGTCGATCTCTCTAAGGTTAAACAGTTCTTTGCTCCGCCTCCACCTGAAGAAGTTAACGAGGTTGCTGTTGAAGTCGAGCGGGATGAAGATGAAGGTGGCATGGTTGGAGAAACATTTACAGATTATCGACCGCCAAAAGTATCCATTGGACCTCCACACCCAGATCCTGTTGTGGAGACGTCTTCCTTGTCTGCAGTGCAGCCACCTGATCCTACCTATGATCCAAAAACTAAAGATAATTTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACCGTGGTCTATGCTTGTCAGAGACACCTTCACCACCTCCCTAATGGAGCTAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGTAAAGGTCGGACAATTGCAGGTCTAATTTGGGAGAACTGGCACCATGGAAGAAGAAAGGCATTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCTAGAAGAGACTTGGATGATGCCGGTGCAACATGTATCGAAGTGCATGCTTTGAACAAACTGCCGTATTCTAAGCTTGATTCAAAGTCTGTTGGGATCAAGGAGGGAGTTGTTTTCTTGACATACAATAGCCTTATAGCATCTTCAGAAAAAGGTAGGTCTCGTCTCCAGCAGCTTGTGCAGTGGTGTGGACCAGGGTTTGATGGCTTAGTAATTTTTGATGAGTGTCACAAAGCAAAAAATTTGGTCCCTGAAGCTGGTAGTCAGCCAACACGCACTGGAGAAGCAGTGCTTGAAATTCAGGATAAACTACCTGAAGCTCGCGTTGTTTATTGCTCAGCAACTGGTGCATCTGAACCCCGCAATATGGGTTATATGGTTAGACTTGGTCTTTGGGGAGATGGAACTTCTTTCTCTGATTTCCGCGAATTTCTTGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATCTATGTCGGACACTTAGCTACGAGGGTGCTGAGTTTGAAGTTATTGAAGCACCATTAGAAGATAAAATGATGGAAATGTACAAAAAAGCAGCAGAATTTTGGGCAGAATTACGAGTAGAATTGCTGTCAGCTAGTGCCTTCCTAAATGATAAACCTAACACTAGTCAGCTATGGCGATTATACTGGGCAAGCCACCAGCGTTTCTTCAGACACATGTGTATGTCTGCTAAAGTCCCCGCTACTGTAAGACTAGCAAAGCAAGCATTAGTTGATGAAAAATGTGTAGTCATTGGTCTCCAGAGTACTGGTGAAGCAAGGACAGAAGAAGCTGTGACAAAATATGGTTCTGAACTTGATGACTTTGTTTCTGGACCTCGAGAATTGCTGCTTAAATTTGTGGAAGAAAATTATCCGTTACCAGAAAAACCTGAACTCCTTCCAGGTGAAGATGGTGTTAAGGAGCTCCAAAGGAAGAGGCACTCTGCAACTCCTGGTGTTTCATTAAAAGGAAGGGTCAGAAAAGCAGCCAAATGGCAACCTCCTAGTGATGCAGAAAGTGATGAAGAATCTGAAACTGATTCTGGCATTGAGTCTAATGACTCAGATGAGGAGTTTCAGATATGTGAAATTTGCACCACTGAGGAGGAAAGGAAAAAATTGCTACAATGTTCGTGCTGTGGTAAATTAGTCCATTCCGCATGCTTGATGCCACCAATTGGTGATGTAGTTCCTGAAGAGTGGTCGTGCCATTTGTGTAAGGAAAAAACTGATGAATATCTTCTAGCAAGGCAGGCCTACATAGCTGAACTCCAGAAGAGGTATGATGCAGCCTTGGAACGTAAGACAAAAATATTAGAGATTATTCGTTCTTTGGATCTTCCAAACAATCCTTTGGATGATATTACTGACCAGCTAGGCGGCCCCGACAAAGTTGCAGAAATTACAGGAAGGAGAGGAATGCTTGTGAGGGGCCCTACTGGAAAGGGTGTAACTTATCAGGCTCGTAATACAAAGGAAGTTACTATGGAAATGGTTAACATGCACGAAAAACAGCTTTTTATGGACGGTAAAAAGTTTGTTGCTATTATCTCTGAAGCTGGATCAGCTGGTGTTTCCTTGCAGGCGGATAGGAGAGCTGCAAATCAGAAAAGAAGAGTTCATTTAACGCTAGAGCTTCCTTGGAGTGCTGACCGTGCAATTCAGCAGTTTGGAAGAACTCATAGATCAAATCAAGCTTCAGCACCAGAATACAGGATACTCTTTACTAATCTTGGTGGAGAACGACGATTTGCATCGATTGTTGCGAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGACCGCAGGGCTGGGCCTTCATTAAGTGCTTATAATTATGATAGCGCTTATGGAAAGAGGGCTCTAATGATTATGTACAAAGGAATAATGGAGCAGGATTCTCTACCTGTTGTGCCTCCGGGATGTTCATCCGACAGACCAGATACTATTCAAGATTTCATTATTCAGGCAAAAGCTGCTCTTGTATCTGTTGGGATAGTTAGGGATTCAACTCTTGGAAATGGTAAAGATCCTGGAAGGTTATCTGGGCGAATTATTGAGTCAGATATGCACGAAGTTGGTCGATTCCTCAATCGGCTTTTGGGACTACCTCCTGATATTCAGAATGGGCTATTTGAATTATTCGTGAGTATATTGGATCTTCTTGTTCGGAATGCTCGCATTGAAGGTAACCTTGACACGGGCATTGTTGACTTGAAAGCTAATGTCATTGAACTACAGGGTACTCCAAAGACAGTTCATGTTGATCAATTGACTGCAGCTTCAACCGTTCTGTTTACGTTCATCTTGGATCGTGGTATTACATGGGAGTCAGCAAGTAGCATGCTGAATGAAAAGCAGAAGGATGGGCTTGGCTCAGCCAATGATGGCTTCTATGAGTCCAAAAGGGAGTGGTTGGGAAAACGTCATTTCATTTTAGCATTTGAAAGTTCTGCTTCGGGTATGTATAAGATAGTTCGTCCTCCCGTTCGGGAATCAAACCGGGAGATGCCTCTATCTGAATTAAAAAGTAAATACAGAAAAGTTTCATCCTTAGAAAAGGCTCAAACTGGTTGGGAAGAGGAATACGATGTCTCATCTAAACAGTGCATGCATGGTCCCAATTGTAAGATTGGCAATTTCTGTACAGTGGGCAGAAGACTACAGGAAGTAAATGTCTTGGGTGGCCTCATTCTTCCTGTTTGGGGAACCATAGAAAAAGCCCTTTCTAAGCAGGCCCGCCTAAGCCATAGGAGGCTACGTGTTGTACGCATAGAAACTACTACTTTGGATAGCAAACGAATTGTTGGACTTCTTGTTCCTAATGCAGCTGTTGAAACTGTGCTTCAAGGTTTAGCATGGGTTCAAGAAATTGATGATTGA 3777 0.4453 MTQPPVPSPPPPLQPPPPPPTAPPSQPSDGVRVRCAGCRMILTVAPGLTEFACPTCRMPQMLPPELMARVHQTAPSTSPLTPPSQNLPAHGIDPTKIQLPCASCKAILNVPHGLSRFSCPQCKVDLAVDLSKVKQFFAPPPPEEVNEVAVEVERDEDEGGMVGETFTDYRPPKVSIGPPHPDPVVETSSLSAVQPPDPTYDPKTKDNLESSKALSCLQIETVVYACQRHLHHLPNGARAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDAGATCIEVHALNKLPYSKLDSKSVGIKEGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLVIFDECHKAKNLVPEAGSQPTRTGEAVLEIQDKLPEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSDFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEDKMMEMYKKAAEFWAELRVELLSASAFLNDKPNTSQLWRLYWASHQRFFRHMCMSAKVPATVRLAKQALVDEKCVVIGLQSTGEARTEEAVTKYGSELDDFVSGPRELLLKFVEENYPLPEKPELLPGEDGVKELQRKRHSATPGVSLKGRVRKAAKWQPPSDAESDEESETDSGIESNDSDEEFQICEICTTEEERKKLLQCSCCGKLVHSACLMPPIGDVVPEEWSCHLCKEKTDEYLLARQAYIAELQKRYDAALERKTKILEIIRSLDLPNNPLDDITDQLGGPDKVAEITGRRGMLVRGPTGKGVTYQARNTKEVTMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMIMYKGIMEQDSLPVVPPGCSSDRPDTIQDFIIQAKAALVSVGIVRDSTLGNGKDPGRLSGRIIESDMHEVGRFLNRLLGLPPDIQNGLFELFVSILDLLVRNARIEGNLDTGIVDLKANVIELQGTPKTVHVDQLTAASTVLFTFILDRGITWESASSMLNEKQKDGLGSANDGFYESKREWLGKRHFILAFESSASGMYKIVRPPVRESNREMPLSELKSKYRKVSSLEKAQTGWEEEYDVSSKQCMHGPNCKIGNFCTVGRRLQEVNVLGGLILPVWGTIEKALSKQARLSHRRLRVVRIETTTLDSKRIVGLLVPNAAVETVLQGLAWVQEIDD* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1455 1258 ProSitePatterns Zinc finger PHD-type signature. 659 703 IPR019786 -
Tpr7g1455 1258 PANTHER STRAWBERRY NOTCH-RELATED 29 1258 IPR026741 GO:0006355
Tpr7g1455 1258 Pfam P-loop containing NTP hydrolase pore-1 179 479 IPR039187 -
Tpr7g1455 1258 MobiDBLite consensus disorder prediction 636 652 - -
Tpr7g1455 1258 MobiDBLite consensus disorder prediction 604 652 - -
Tpr7g1455 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 422 IPR027417 -
Tpr7g1455 1258 Pfam C-terminal domain on Strawberry notch homologue 747 1036 IPR026937 -
Tpr7g1455 1258 MobiDBLite consensus disorder prediction 184 206 - -
Tpr7g1455 1258 SMART PHD_3 658 704 IPR001965 -
Tpr7g1455 1258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 642 726 IPR013083 -
Tpr7g1455 1258 ProSiteProfiles Zinc finger PHD-type profile. 656 706 IPR019787 -
Tpr7g1455 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 802 907 IPR027417 -
Tpr7g1455 1258 MobiDBLite consensus disorder prediction 1 26 - -
Tpr7g1455 1258 SUPERFAMILY FYVE/PHD zinc finger 649 708 IPR011011 -
Tpr7g1455 1258 PANTHER OS08G0223700 PROTEIN 29 1258 - -
Tpr7g1455 1258 Gene3D - 205 409 IPR027417 -
Tpr7g1455 1258 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1455 Tpr-Chr7 16094943 16116124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1455 - - gmx:100808670 2229.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1455 7 16094943 16116124 Tpr7g1455 7 16094943 16116124 ECH