Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1453 ATGGGAAACTCGCAGATGAAAAAGCGTGACAGTGAATTTTCAGGAAATGTTGATTCACCAAGAATCACATCCACCTTAAACAGATCCCTCTCACCACACTCGGACTCACCTCGATCTAAACAGTTCTCTTCAACAAGTTCAGGGAAACTCTCTACTAAGGACAAATATGCTTTCATTCCTGATAATTTCACTACTCTTCAACAGGTTACAAGTGCCTTGAGGAAAGAAGGTTTAGAATCCTCAAATCTTATCCTTGGAATCGACTTTACGAAAAGTAATGAATGGACTGGAAGAAACTCATTCAATAATAGAAGCCTGCATGCTATTGGAGATACGCCTAACCCTTACGAGAAAGCCATTTCTATTATTGGCAAGACTTTGGCTCCTTTTGATGACGACAACTTGATTCCTTGTTTTGGCTTTGGTGATGCTACGACTCATGATCACGAAGTGTTTAACTTTCATGCTGATAACACATCTTGCCATGGATTTGAGGAAGTTTTGGCTTGCTATCAAAAAGTCGTTCCAAACTTGAGTCTTTCGGGACCAACTTCATATGCTCCGGTGATTGAGGCTGCAATAGACATTGTCGAGAAAACTCATGGCCAATTCCATGTTTTAGTTATTGTTGCAGATGGCCAGGTTACAACAAATGGAAACAATGATGGAAAATTAAGTCCTCAAGAAGAGAAGACAATAAAGGCAATCGCTGATGCAAGTTCATATCCTCTTTCTATTGTTCTGGTTGGAGTTGGTGATGGACCTTGGGAAGATATGAAAAAGTTTGATGACAAATTACCTGCACGTGATTTTGACAATTTTCAGTTTGTTAACTTCACAGACATTATGTCTAAAAAAATTAGCACGTCTGCGAAAGAAGCTGCGTTTGCTCTGGCTGCACTTATGGAGATACCTTTCCAATATAAAGCAACCCTTGAGCTTGGATTACTAGGTCGTGCAACAGGAAGGGCAAAGAAAATGGTTCCAAGACCTCCTCCGGCTCCTTATTCAAGACCAATGCCACCAGAACATTTTCTGAGGAACATGTCAACATCATCAATCGATGACGAGCAAAACCAAATGGTATGTGCTATATGTCTGACCAATAGAAAGGATTTGGCCTTTGGATGTGGTCATATGACCTGCAGAGATTGTGGTTCCAGATTAAGCAATTGTCATATATGCCGCCAGAGGATCACCAATCGTCTAAGAGTGTATACTGGATGA 1227 0.4067 MGNSQMKKRDSEFSGNVDSPRITSTLNRSLSPHSDSPRSKQFSSTSSGKLSTKDKYAFIPDNFTTLQQVTSALRKEGLESSNLILGIDFTKSNEWTGRNSFNNRSLHAIGDTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFNFHADNTSCHGFEEVLACYQKVVPNLSLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNGNNDGKLSPQEEKTIKAIADASSYPLSIVLVGVGDGPWEDMKKFDDKLPARDFDNFQFVNFTDIMSKKISTSAKEAAFALAALMEIPFQYKATLELGLLGRATGRAKKMVPRPPPAPYSRPMPPEHFLRNMSTSSIDDEQNQMVCAICLTNRKDLAFGCGHMTCRDCGSRLSNCHICRQRITNRLRVYTG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1453 408 Gene3D von Willebrand factor, type A domain 82 297 IPR036465 -
Tpr7g1453 408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 348 407 IPR013083 -
Tpr7g1453 408 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RGLG4 34 407 - -
Tpr7g1453 408 Pfam Zinc finger, C3HC4 type (RING finger) 360 400 - -
Tpr7g1453 408 ProSiteProfiles Zinc finger RING-type profile. 363 396 IPR001841 -
Tpr7g1453 408 CDD RING-HC_RGLG_plant 362 406 IPR045317 GO:0061630|GO:0070534
Tpr7g1453 408 MobiDBLite consensus disorder prediction 1 48 - -
Tpr7g1453 408 SUPERFAMILY vWA-like 81 263 IPR036465 -
Tpr7g1453 408 SUPERFAMILY RING/U-box 357 403 - -
Tpr7g1453 408 Pfam Copine 105 317 IPR010734 -
Tpr7g1453 408 PANTHER COPINE FAMILY PROTEIN 1 34 407 - -
Tpr7g1453 408 SMART VWA_4 80 282 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1453 Tpr-Chr7 16074220 16081082 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1453 7 16074220 16081082 Tpr7g1453 7 16074220 16081082 ECH
Tpr7g3117 7 38626398 38630732 Tpr7g1453 7 16074220 16081082 PCT