Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0832 ATGAAATCCATGAATGACAGTAGTAGTAACTCTGATGACAGAAACAACAACAACTGGTTAGGTTTCTCTCTCTCACCCCACATCAAAATTGGTGATGAACTTTCTTCTTCTCCTCTTCATAATCATTACCAACAACCTTCTTCAGCTTCCAACACTGTTCCTACATCTTTCTATTTTTCACCTTCTCATTTCACCAACTCTGCTATCTGTTATGGTGTTCCTGAAAATGCTAACTTTCATTCCCCTTTAACTGTTATGCCTCTTAAGTCTGATGGGTCTCTTTGTATCATGGAAGCTCTTGGTAGATCACAATCACAAGTGATAGTGTCATCATCTTCATCTCCAAAACTAGAGGACTTTCTAGGTGGTGCAACAATGGGAACTCATGATGAATATGTTAGCCATGAAAGAGAAGCAATGGCTTTAAGTTTGGATAGTATTTACTATAATGGTCAACAAAATGCAGATCCTCATCAAGCTAATAGAGACCATTCACTTGAACTTCTTTCAGAATCATTCAGACAACAAACATCATCACATCCATATTATGCAGCACTTGGTTATCATGGAATGTTTCAAACACCATTAGAGGTAGTAGTAGAATCAAAGGAAAACACAAACCATGTTGACGTTTGTAGTTCTCAAATGCCTCAAAATTGGGTGTCATCAAGAGATTATTCTTCTTCTGCTTCTCTGACTTTGGAGCAACAAATGAACAATGGTGGAGCTGGTTCTGGTGCTGCTGATGGTGGAGGAGGTGGTTCTGTTGGTACTGTAGGGTGTGGTGAGTTACAATCTTTAAGTCTTTCAATGAGTCCTGGTTCTCAATCTAGTTGTATTACTGCTCCTAGTCAGATCTCACCTACTGGAACAGAATCAGTGACTATGTCTATGGATGCTAAAAAAAGAGGAGCTGCTAAGCTTGGACAGAAGCAACCTGTCCATAGGAAATCTATTGACACTTTTGGACAAAGAACTTCACAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAAGAAGGACAGACTAGAAAAGGAAGACAAGTATATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCAAGCAGCACTTAAGTATTGGGGACCTTCAACACATATAAACTTCCCGTTAGAAAATTACCAAATTCAACTTGAGGAAATGAAGAACATGACTAGGCAGGAATATGTTGCACATTTGAGAAGAAAAAGCAGTGGTTTTTCTAGGGGTGCTTCAATGTACAGAGGAGTCACAAGACACCACCAACATGGTAGGTGGCAAGCTAGGATTGGAAGAGTTGCTGGTAACAAAGATCTTTACCTTGGAACATTCAGCACTCAAGAGGAAGCAGCAGAAGCATATGATGTAGCAGCAATAAAATTCCGTGGATCGAATGCTGTCACAAATTTTGACATCTCTAAATATGATGTTGAAAGGATCATGGCTAGTAATACTCTTCTGTCCGGCGAGCATGCAAGGAGAATCAAAGATAACGTTCCACTTATCGAATATAACAACGATACTAATGTATCGAGCCAGAACATTGGAGAAGCTGCCCAAGTTCGAAACAACAATGAAAATGATTCTAAATGGAAGATGGTATCAAATAGTTGTGACCAAAAAAATGTTGTGAATTCTAGTGGAAGTTACAAAAATTCAGATTTCTCTATGTGTTTACAAGACCTTGTTGCTGGCCAACAACATGTGTTGGATGATTCTAACAAGATTGGGACTCATTTTTCAAATCCATCTTCATTAGTGACAAGTTTAAGCTCTTCAAGAGAAGCTAGTCCTGATCATAAAACTGGTCCTTCTCTACTTTTTCCAAAGCTTCCAATGGAATCAAAAATTGCTACTAATGGTGTTAGTTCTTGGTTTCCTTCACAAGTAACAAATCAAATGAGGCCAACTTCTTCTATCAATTTGTCACATTTTCCAGTTTTTGCTGCATGGAATGATGCCTAG 2016 0.3874 MKSMNDSSSNSDDRNNNNWLGFSLSPHIKIGDELSSSPLHNHYQQPSSASNTVPTSFYFSPSHFTNSAICYGVPENANFHSPLTVMPLKSDGSLCIMEALGRSQSQVIVSSSSSPKLEDFLGGATMGTHDEYVSHEREAMALSLDSIYYNGQQNADPHQANRDHSLELLSESFRQQTSSHPYYAALGYHGMFQTPLEVVVESKENTNHVDVCSSQMPQNWVSSRDYSSSASLTLEQQMNNGGAGSGAADGGGGGSVGTVGCGELQSLSLSMSPGSQSSCITAPSQISPTGTESVTMSMDAKKRGAAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYQIQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGSNAVTNFDISKYDVERIMASNTLLSGEHARRIKDNVPLIEYNNDTNVSSQNIGEAAQVRNNNENDSKWKMVSNSCDQKNVVNSSGSYKNSDFSMCLQDLVAGQQHVLDDSNKIGTHFSNPSSLVTSLSSSREASPDHKTGPSLLFPKLPMESKIATNGVSSWFPSQVTNQMRPTSSINLSHFPVFAAWNDA* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0832 671 Pfam AP2 domain 431 480 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 Pfam AP2 domain 328 386 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 PRINTS Ethylene responsive element binding protein signature 329 340 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 PRINTS Ethylene responsive element binding protein signature 470 490 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 CDD AP2 429 490 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 ProSiteProfiles AP2/ERF domain profile. 328 394 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 SUPERFAMILY DNA-binding domain 327 396 IPR016177 GO:0003677
Tpr7g0832 671 CDD AP2 327 394 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 Gene3D AP2/ERF domain 327 396 IPR036955 GO:0003700|GO:0006355
Tpr7g0832 671 Gene3D AP2/ERF domain 430 490 IPR036955 GO:0003700|GO:0006355
Tpr7g0832 671 SUPERFAMILY DNA-binding domain 429 490 IPR016177 GO:0003677
Tpr7g0832 671 ProSiteProfiles AP2/ERF domain profile. 430 488 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 SMART rav1_2 430 494 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 SMART rav1_2 328 400 IPR001471 GO:0003700|GO:0006355
Tpr7g0832 671 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 15 669 - -
Tpr7g0832 671 MobiDBLite consensus disorder prediction 604 624 - -
Tpr7g0832 671 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0832 Tpr-Chr7 7342983 7346801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0832 1 516 AP2-EREBP Transcription Factor Family AT4G37750 52.399 2.90e-167 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Tpr7g0832 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0832 K09285 - gmx:100798179 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0832 7 7342983 7346801 Tpr7g0832 7 7342983 7346801 ECH
Tpr1g3600 1 40160751 40165248 Tpr7g0832 7 7342983 7346801 PCT