Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0830 ATGGTGGACTCTTACGCGCTCGAATTCATAATAACCTCCGTTATCACCATCTTCGCACTCTACAATTTCATTCTCTCTCGTAAGAATCGTTCTGAAGCAGCAACCACTTCAAACACAACCGAGAACATTACAACCGCCACCGGTGAATGTAGATCTTTTAATCCTAACGGAGACGTTGATATCATCATTGTTGGTGCCGGTGTTGCTGGCTCCGCTCTCGCTTACACTCTCGGCAAGGATGGACGTCGAGTACTTGTTATTGAACGTGATTTGAATGAACCGGACCGAATTGTTGGAGAGTTGCTACAGCCTGGAGGCTATCTCAAATTGATTGAGCTGGGTCTTGAAGATTGTGTGGAGAAAATTGATGCTCAGAAAGTGTTTGGATATGCTCTTTTCAAGGATGGGAAACACACACGACTCTCTTATCCCTTGGAAAAGTTTCACTCAGATATCGCTGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGAGAGAAGGCTTCCTCCCTTCCCAATGTACGATTGGAGCAAGGAACTGTCACTTCCCTGCTTGAAGAACAAGGTATAATTAAAGGTGTACAGTACAAAACGAAAGATGCTCAGGAATTATCAGCATGTGCACCTCTTACCATTGTTTGTGATGGCTGTTTCTCCAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTAGAGGTTCCCTCTTGTTTTGTTGGCTTAGTTTTGGAAAATTGTGAACTTCCATGTGCAAATCATGGTCACGTCATACTAGGAGATCCTTCACCGGTTCTGTTCTATCCCATAAGTAGTACAGAAGTTCGCTGTCTGGTTGATGTTCCTGGTCAGAAGGTTCCATCTATCGCCAATGGTGAAATGGCAATGTATTTGAAGACAGTGGTGGCTCCACAGGTTCCCCCTGAGATTCATGATGCTTTCATAGCTGCCGTGGACAAGGGTAACATAAGGACAATGCCTAACAGAAGCATGCCAGCTGCTCCTTATCCTACTCCAGGAGCCCTTTTGATGGGAGATGCATTCAACATGCGCCATCCCCTAACCGGTGGCGGGATGACTGTGGCATTATCTGATATAGTAGTGCTGCGAAATCTCCTCAAGCCTTTGCGTGACCTGAATGATGCACCTAGCCTTTGCAAATACCTTGAATCCTTCTATACCTTGCGTAAGCCAGTAGCATCCACCATAAATACGTTGGCAGGAGCACTTTACAAGGTTTTTTGCGCATCACCTGATCCAGCCAGGAAAGAAATGCGCCAAGCTTGCTTTGATTATCTGAGTCTTGGGGGTTTATTCTCAGAAGGACCAGTCTCTTTGCTTTCAGGATTAAATCCTCGCCCCTTGAGTTTGGTTCTTCATTTCTTCTCCGTCGCAATATATGGTGTTGGACGTTTATTGTTACCATTTCCTTCCCCTAAACGCATATGGATTGGAGTCCGATTAATTGCTAGTGCATCAGGAATCATCTTGCCCATAATTAAGGCAGAAGGAGTACGTCAAATGTTCTTCCCTGCAACTGTTCCAGCTTATTACAGAACTCCTCCGGCTGCATAA 1572 0.4517 MVDSYALEFIITSVITIFALYNFILSRKNRSEAATTSNTTENITTATGECRSFNPNGDVDIIIVGAGVAGSALAYTLGKDGRRVLVIERDLNEPDRIVGELLQPGGYLKLIELGLEDCVEKIDAQKVFGYALFKDGKHTRLSYPLEKFHSDIAGRSFHNGRFIQRMREKASSLPNVRLEQGTVTSLLEEQGIIKGVQYKTKDAQELSACAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLVLENCELPCANHGHVILGDPSPVLFYPISSTEVRCLVDVPGQKVPSIANGEMAMYLKTVVAPQVPPEIHDAFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDAPSLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFSVAIYGVGRLLLPFPSPKRIWIGVRLIASASGIILPIIKAEGVRQMFFPATVPAYYRTPPAA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0830 523 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 522 - -
Tpr7g0830 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 60 82 - -
Tpr7g0830 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 209 224 - -
Tpr7g0830 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 352 - -
Tpr7g0830 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 352 368 - -
Tpr7g0830 523 Pfam NAD(P)-binding Rossmann-like domain 63 89 - -
Tpr7g0830 523 Gene3D - 52 430 IPR036188 -
Tpr7g0830 523 Pfam Squalene epoxidase 210 482 IPR013698 GO:0004506|GO:0016021|GO:0050660
Tpr7g0830 523 SUPERFAMILY FAD/NAD(P)-binding domain 58 434 IPR036188 -
Tpr7g0830 523 PANTHER SQUALENE MONOOXYGENASE 1 522 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0830 Tpr-Chr7 7303557 7308849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0830 19 521 Miscellaneous Gene Families AT1G58440 77.228 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0830 K00511 - gmx:100820031 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0830 7 7303557 7308849 Tpr7g0830 7 7303557 7308849 ECH
Tpr1g3594 1 40087004 40091354 Tpr7g0830 7 7303557 7308849 PCT