Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0824 ATGGGGAGAGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGACCTTGGTCACCAGAAGAAGATGCTAAGCTCAAATCCTACATCCAACAACATGGTACTGTTGGTAACTGGATCACTTTGCCACAAAAAATTGGCCTTAAGCGATGTGGCAAGAGTTGTCGGCTAAGATGGCTAAACTATCTTCGCCCTAACATCAAGCACGGTGGTTTCACCGAAGAAGAAGACAACATCATTTGTAACCTTTACATCAGAATTGGAAGCAGGTGGTCGGTTATTGCAGGCCAATTGCCAGGAAGAACTGATAATGATATAAAGAACTATTGGAACACGAAGCTGAAAAAGAAGCTTTTAGGGAAACATCGGAAAGAACAACAATTGCAAGTACGTAGTAATAGATTATTAGCCGGTGTTAAGCACGATGAGAGAAATGGAAGAAAGAGTGAAAGTTTTTCATCAAATTTGGTTTATGAAAATACTACTCAACAACATATGTTAAATCCATATTGGCCATCAAATAATATACCTATGCATATTCCACCGTTGACATACACAAACCAACAAGGTCATACTCCTCCTAGTTTCAACGATCAAGATTCGATTAGAAAATTGTTAATCAAGCTTGGAGGGAGATTCTCTAATGAAGATGATGATTGTTATCAACCAATCCTTGATCATGAGTTCAATTTTCAATTCCCAGATAACGGAGTTTCTGCGATGCAACAAATTCATGAAGAACATATTGGCTCTTCTTCCGGCTGCACGAGCTCTATAATGAACAATAACCAATTAGTACAATATTTTTCTGATCAGTCTCAAAGTTATGATCATCAGTATTATGGTGAAGGAGTAACAGGACAAGAATTGGTGCAAGAACAAGGAAGTTTCACTGCAACAACAACGACATCTAGTAATAATAATTATTCGCAGAAGTTAAGCGGGTTGGAATTCATCTACGGAGAAGACATGGACGGTACAATTTGTAGTAACTGGGGTGAGACTGAGCTGTAG 1011 0.3887 MGRAPCCDKANVKKGPWSPEEDAKLKSYIQQHGTVGNWITLPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICNLYIRIGSRWSVIAGQLPGRTDNDIKNYWNTKLKKKLLGKHRKEQQLQVRSNRLLAGVKHDERNGRKSESFSSNLVYENTTQQHMLNPYWPSNNIPMHIPPLTYTNQQGHTPPSFNDQDSIRKLLIKLGGRFSNEDDDCYQPILDHEFNFQFPDNGVSAMQQIHEEHIGSSSGCTSSIMNNNQLVQYFSDQSQSYDHQYYGEGVTGQELVQEQGSFTATTTTSSNNNYSQKLSGLEFIYGEDMDGTICSNWGETEL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0824 336 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Tpr7g0824 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Tpr7g0824 336 Gene3D - 69 135 - -
Tpr7g0824 336 PANTHER OS09G0431300 PROTEIN 1 324 - -
Tpr7g0824 336 CDD SANT 16 62 IPR001005 -
Tpr7g0824 336 CDD SANT 71 111 IPR001005 -
Tpr7g0824 336 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Tpr7g0824 336 Gene3D - 7 68 - -
Tpr7g0824 336 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Tpr7g0824 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Tpr7g0824 336 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Tpr7g0824 336 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Tpr7g0824 336 PANTHER TRANSCRIPTION FACTOR MYB36-LIKE 1 324 - -
Tpr7g0824 336 SMART sant 67 115 IPR001005 -
Tpr7g0824 336 SMART sant 13 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0824 Tpr-Chr7 7246586 7248441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0824 1 207 MYB Transcription Factor Family AT3G49690 60.870 2.76e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g0824 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0824 K09422 - gmx:778079 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0824 7 7246586 7248441 Tpr7g0824 7 7246586 7248441 ECH
Tpr1g3587 1 40025093 40027267 Tpr7g0824 7 7246586 7248441 PCT