Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3612 ATGACAAAGTCTTCCCATTACTTTGCTCACAGTTTCATTTCATCATCAATATCATATCATATAAATACACATAACTCAAACACATTTTCACAACTACAATTCAAAGTTTCAAAGTTTCAAACCCACTTCATATATTCACATTCAAATTCTCTCAACAAAAAAAAAAAAACATTTTTTTTAAAACCATCTTTTTTGATCATGATGAGGAACAAGGGACAAAGCCAAAACATGTTTATTAGGATCATGTCTTCACCAATAAGAGCATTAGGAAAAGCAAGAGATGCATATGTAAGAAGCATAACAAATTGTGGTCAAAGTTATGGTGGTAGTTATCCAATGGATGCTGCTTCAAAATTTTCATCTTTATCAAGAAGTCAAAGTGCAGCAACATCAAGAAGATCAACATCATCATCAAGAAGATCAACATCATCACCATTAGAAGGTAATGAAGATTTTGCTGAACTTGTTAGAGCTGCTTCAGCTAGAACTTTGGTTACTAGACTTGATATGGATTTGGTTCTTAAACAACAGCAGCAACAGCAACAGAAATTGAATAAAGGATTGCCTAAATCTAGTAGTGTTAGTATGGCTAAGATTGATGAAGATATGCCTTTTGATTCTAGTGTTGAAGGAAAAATTGGTTTTGTTGCTGATTCTTATCCTAGATCTAAGAGTTATGCTGTTGGTCATAATAGACATAGAAATGTTGCTTTCTGA 717 0.3264 MTKSSHYFAHSFISSSISYHINTHNSNTFSQLQFKVSKFQTHFIYSHSNSLNKKKKTFFLKPSFLIMMRNKGQSQNMFIRIMSSPIRALGKARDAYVRSITNCGQSYGGSYPMDAASKFSSLSRSQSAATSRRSTSSSRRSTSSPLEGNEDFAELVRAASARTLVTRLDMDLVLKQQQQQQQKLNKGLPKSSSVSMAKIDEDMPFDSSVEGKIGFVADSYPRSKSYAVGHNRHRNVAF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3612 238 MobiDBLite consensus disorder prediction 122 149 - -
Tpr1g3612 238 MobiDBLite consensus disorder prediction 122 148 - -
Tpr1g3612 238 PANTHER - 68 231 - -
Tpr1g3612 238 PANTHER OS07G0123800 PROTEIN 68 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3612 Tpr-Chr1 40300255 40301483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3612 - - gmx:100798910 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3612 1 40300255 40301483 Tpr1g3612 1 40300255 40301483 ECH
Tpr1g3612 1 40300255 40301483 Tpr7g0842 7 7455442 7456332 PCT