Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3593 ATGAAGGAAGATGAAGGTGATGATAAGAAAATCAGCGAAGAGAAAATTCAAGATATTAAGCTTTGGGGAATTTTCCTCTTCGGTTTAATTGGCGCTACCGCCACCAGTTTCGCCCTGTCCAGATCAAAAGTTAGTTATTTTCGATCAGCTTTTCAAGAAGAAGCTTGGAAGAGATACAATAAGCGATTGCAAGAGGAATATGAGGAAGAGATGGAAAGAGTGGAAAGAATAAGGCGTATGCAAAATGTGTTTAATAAAGAAAGGGATAAGTTTAGAAGAAATTACGATAATTGGAAGGAAACTGGTTCTGGTACATATCATCAGCATTTCCAAAGAGATGATTGGTATTGGAAGGCTGAACAAACCTTCAGAGACCAGTGGAGTCATTACCGAGACACCCCAAGGGAAAACGGAAGCATAAATAATTCATTATTATCACACCACTACTCGGTTTTGGGTCTCGACAGGTCCAGAACAACACCATATACAGATGCTGAGATTAAGACAGCATTTAGGACCAAAGCAAAGCAGTATCATCCTGACCAGAACCAGGAGGATAGAGTGGCTGCTGAGGCTAAATTCAAAGAAGTAATGGGTTCATATGAGGCCATACAACAACAAAGAAAGAATCATAGTCTGTAA 642 0.3972 MKEDEGDDKKISEEKIQDIKLWGIFLFGLIGATATSFALSRSKVSYFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQNVFNKERDKFRRNYDNWKETGSGTYHQHFQRDDWYWKAEQTFRDQWSHYRDTPRENGSINNSLLSHHYSVLGLDRSRTTPYTDAEIKTAFRTKAKQYHPDQNQEDRVAAEAKFKEVMGSYEAIQQQRKNHSL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3593 213 CDD DnaJ 148 197 IPR001623 -
Tpr1g3593 213 SUPERFAMILY Chaperone J-domain 147 209 IPR036869 -
Tpr1g3593 213 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 3 213 - -
Tpr1g3593 213 Gene3D DnaJ domain 122 212 IPR036869 -
Tpr1g3593 213 PRINTS DnaJ domain signature 149 167 IPR001623 -
Tpr1g3593 213 PRINTS DnaJ domain signature 171 186 IPR001623 -
Tpr1g3593 213 PRINTS DnaJ domain signature 189 209 IPR001623 -
Tpr1g3593 213 ProSiteProfiles dnaJ domain profile. 147 209 IPR001623 -
Tpr1g3593 213 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 213 - -
Tpr1g3593 213 Pfam DnaJ domain 148 209 IPR001623 -
Tpr1g3593 213 SMART dnaj_3 146 209 IPR001623 -
Tpr1g3593 213 Coils Coil 53 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3593 Tpr-Chr1 40077829 40081610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3593 - - gmx:100804936 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3593 1 40077829 40081610 Tpr1g3593 1 40077829 40081610 ECH
Tpr1g3593 1 40077829 40081610 Tpr7g0829 7 7299299 7303277 PCT