Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3578 ATGGGATCCAAAGTAATAGTAATATTCATTATTCTCTTGGTGCTGGCAATTTCAGTTTATGGTACTAACAATGATGGCTCGTTCTCTAGACAGAAGATTTTGGAGGTTGAGAGAAAATTACAACATCTTAGAAAACATTCATTAAAAACCATTCTGAGTGAAGATGGGGATACTATTGATTGCATCGACATTAACAAGCAGCCTGCCTTTGATCATCCCGCCTTGAAAGATCACAAAATTCAGATGGCTCCAAGTTACACTTCAGCTAAGAAGGGCACAACCGAAGTTACCAAAACAAATGAGAAATTAACTTCCCAACAAGTATGGCGAAAAAGTGGAAGCTGTCCAAAGGGAACAATACCTGTTCGAAGAATACGAAAGAGAGAGCTTCTCAAGGCTCACTCAATTGATGAATATGGAAGGAAGAAACCAAGTATCTTAAACAGAAAAGTCAGTGATAAGCTGAATCAAAATGTTGATTCCTTTGTACAACAACAAAATCACTCGAAGGCAATAGTCTTCGCATATGGATTCAGGTACGTGGGAGGTAAAGGAGATATTCGAGTTGCCTATCCTTTTGTTGAAAAGGATGATGAATACAGCACTGCTCAGGTCTCTCTCATAAATGGATCTTACGATTATTACGAGCTTGTTGAATCCGGATGGGCGGTCAATCCCAGTGTATACGGAGATAGGAACACCCGGTTATTCGTATATTGGACGGCTGATGGTTCACATAGAACAGGTTGCTTTGATCTGACTTGTCCTGGGTTTATTCAAACTAACAGTGAAATTGCCTTAGGTGCTACAATTTATCCAATTCCAATTCCTGGTGGTCTTCCATACCAAATAACTATTTACATCCAGAAGGACGAAATGACTAATAATTGGTGGGTGCAATATGGTGAAGAGAAGACCAACATAGGTTATTGGCCAACTGAGCTATTCATGGGAATGCGCTCCAATGCCGAATCAGTGGAGTGGGGTGGTGAAGTTTACAGCACAGCTGTTGGACATACTCCTCATACAAAAACACAAATGGGTAGCGGTTTTTATGGTTCGTGGGGGTATCCAGTTGCGGCTTCCATATTAGGGATGAGAGTTCACGATAATTATCCGATGTGGAAGATTCCAGAATGGGTTGATAAATTCTCCGATGAATATAACTGTTATAACGTTGAATATATAGCAGATTATGTTGATGATCCACTATTCTATTATGGAGGACCTGGTAGAAATATTAGGTGCCCTTAA 1254 0.4003 MGSKVIVIFIILLVLAISVYGTNNDGSFSRQKILEVERKLQHLRKHSLKTILSEDGDTIDCIDINKQPAFDHPALKDHKIQMAPSYTSAKKGTTEVTKTNEKLTSQQVWRKSGSCPKGTIPVRRIRKRELLKAHSIDEYGRKKPSILNRKVSDKLNQNVDSFVQQQNHSKAIVFAYGFRYVGGKGDIRVAYPFVEKDDEYSTAQVSLINGSYDYYELVESGWAVNPSVYGDRNTRLFVYWTADGSHRTGCFDLTCPGFIQTNSEIALGATIYPIPIPGGLPYQITIYIQKDEMTNNWWVQYGEEKTNIGYWPTELFMGMRSNAESVEWGGEVYSTAVGHTPHTKTQMGSGFYGSWGYPVAASILGMRVHDNYPMWKIPEWVDKFSDEYNCYNVEYIADYVDDPLFYYGGPGRNIRCP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3578 417 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 10 414 - -
Tpr1g3578 417 Gene3D - 191 310 - -
Tpr1g3578 417 Pfam Neprosin 198 410 IPR004314 -
Tpr1g3578 417 PANTHER ASLB (DUF239)-RELATED 10 414 - -
Tpr1g3578 417 Pfam Neprosin activation peptide 50 171 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3578 Tpr-Chr1 39924987 39927566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3578 - - gmx:100816380 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3578 1 39924987 39927566 Tpr1g3578 1 39924987 39927566 ECH
Tpr1g3578 1 39924987 39927566 Tpr7g0811 7 7162135 7166412 PCT