Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3576 ATGCAATCGAGGGTTGTAGCATCTGAAGAAGGAAAATCAAAAGGGTTATCATTAGGATCATTGCGTTTATTTATTGTTTTTGTTGCTCTATGTGTTGTGTTTTCTGTAATAAGTATATATACTCTTAAACATTTTGGAATTGAGAATGTTGTTACTACAATGAGTTCAAGTTTTCAACCATGTGTTGAGGAACATGCTGGTTTGGAACAATGGATTAAACCACCTTCAAATCTGATCCATAATATGACTGATGAAGAACTTCTTTGGAGAGCTTCTTTAGTTCCTAAGATTAAGAATTACCCTTTTCAAAGAGTTCCAAAGATTGCTTTTATGTTCCTTACTAAAGGACCATTGCCTCTTGCACCACTTTGGGAGAGGTTTCTGAAAGGGCATGAGAGTCTTTTTACTGTATATATTCATCCTTTGCCTTCATATCAAGCTCAGTTTCCTTCTTCATCTGTTTTTTATAAGAGGCAAATCCCTAGTCAGATTGCCGAATGGGGAAGGATGAGCATGTGTGACGCTGAAAGAAGACTACTTGCTAATGCGTTACTCGACATCTCCAATGAGTGGTTTATTCTATTGTCTGAATCATGCATCCCTCTCTACAAATTCAGTCTAGTCTACCACTACTTAATGAAATCCAAATACAGCTATGTTGGAGCATTTGATGATCCTGGTCCATACGGAAGAGGACGCTATAACCCAAACATGGCCCCTCTAGTAAACATTACAAAGTGGCGTAAAGGTTCTCAATGGTTCGAAGTAAATCGAAAGCTAGCCGTCAACATTGTGGAAGACACTACATTTTATCTGAAGTTCGAACAATATTGTAGACCAGCTTGTTACGTCGACGAGCACTATTTTCCTACCATGTTAACCATTCAAGCGGGGAGTGCGTTGGCGAACCGGAGCATAACTTGGGTGGACTGGTCTAGAGGTGGGGCTCACCCGGCTACATTTGGAAGATCAGATATTACAAAGGAGTTTTTCGATAGAGTTCATGGAGGTCAAAAATGCAAATATAATGATAGAAACTCTACACTTTGTGTTCTATTTGCAAGAAAATTTGCTCCTAGTACATTGGAACCTTTGTTAGATATGGTGAATTCAAAAGTCTTAGACTTCTGA 1131 0.3873 MQSRVVASEEGKSKGLSLGSLRLFIVFVALCVVFSVISIYTLKHFGIENVVTTMSSSFQPCVEEHAGLEQWIKPPSNLIHNMTDEELLWRASLVPKIKNYPFQRVPKIAFMFLTKGPLPLAPLWERFLKGHESLFTVYIHPLPSYQAQFPSSSVFYKRQIPSQIAEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFSLVYHYLMKSKYSYVGAFDDPGPYGRGRYNPNMAPLVNITKWRKGSQWFEVNRKLAVNIVEDTTFYLKFEQYCRPACYVDEHYFPTMLTIQAGSALANRSITWVDWSRGGAHPATFGRSDITKEFFDRVHGGQKCKYNDRNSTLCVLFARKFAPSTLEPLLDMVNSKVLDF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3576 376 Pfam Core-2/I-Branching enzyme 108 334 IPR003406 GO:0016020|GO:0016757
Tpr1g3576 376 PANTHER - 11 369 - -
Tpr1g3576 376 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 11 369 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3576 Tpr-Chr1 39904869 39915126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3576 - - gmx:100785919 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3576 1 39904869 39915126 Tpr1g3576 1 39904869 39915126 ECH