Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0010 ATGACTCAGCCATCGGTGCCTCCGCCGCCGTTGGCCCCAACCCATTCCCCGCCCTCCCACGCCGGACAAGGCGTCCAAGTGCGCTGCGCCGGTTGCCGCATGATCTTGACGGTAGCGCCTGGACTGACGGAGTTCGCTTGCCCTACTTGTCGAATGCCGCAGATGCTGCCCCCGGAGCTCATGAGTAGGGCCCACCAGAAACCGTCTCTTCTCCCACCTTTGCCTCCTGCGTCGTCGCAGCAGACACACGTGCCCGCCCACGGCATTGATCCTACTAAGATCCAGCTTCCCTGTGCTAGCTGTAAGGCCATCCTCAATGTGCCTCATGGCCTCGCGAGGTTCGCTTGCCCGCAATGTGGGGTTGACCTCGCCGTCGATATCTCAAAGGTCAAGCAGTTCTTCCCTTCCGGACCTCCTCCCGAGGAAGTCAACGAGCTAGCTGTTGAAGTTGAGCGTGATGAAGATGAAGGTGGCCTTGTTGGTGAAACATTTACAGATTATCGGCCACCAAAAGTATCTATTGGACCCTCACACCCTGATCCTGTCGTAGAAACATCTTCTTTGTCTGCTGTGCAGCCACCTGAGCCTACTTATGACCCAAAAATTAAAGATGATTTAGAGAGTTCAAAGGCATTGTCATGCTTGCAAATTGAGACATTGGTCTATGCTTGTCAGAGACACCTTCAGCACCTCCCCAGCAATGCTAGGGCAGGATTCTTTATTGGGGATGGAGCTGGTGTAGGTAAAGGTCGAACTATTGCAGGGCTAATATGGGAGAACTGGCACCACGGAAGAAGAAAAGCACTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGACGCGAGAAGAGACTTGGATGATGTGGGTGCAACTTGCATTGAAGTGCATGCTTTGAACAAACTGCCTTACTCTAAGCTTGATTCCAAGTCTGTTGGGGTTAGGGAGGGAGTTGTTTTCTTGACATACAATAGCCTCATAGCATCATCTGAGAAAGGTCGTTCTCGTCTACAACAGCTTGTGCAGTGGTGTGGACCAGGATTTGATGGTCTTGTCATTTTTGATGAGTGTCACAAGGCCAAAAATTTGGTACCTGAATCTGGCAGTCAGCCAACACGAACAGGTGAAGCAGTGGTTGATATCCAGGCTCGACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCTACTGGTGCATCTGAACCTCGCAATATGGGTTATATGGTTCGACTTGGTCTTTGGGGCGCTGGGACTTCTTTCTCTGACTTCCGTGAATTTCTAGGTGCTCTTGATAGAGGAGGTGTTGGAGCGCTTGAACTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGTCGGACACTTAGCTACAAGGGTGCTGAGTTTGAAGTAATTGAAGCACCATTAGAAGATGAAATGACGGATATGTATAAAAAGGCAGCAGAATTTTGGGCAGAATTACGAGTTGAATTGCTCTCAGCCAGTGCCtttttaaataatgagaaaCCTAGTTCTAGTCAGCTTTGGCGATTATACTGGGCAAGTCATCAGCGTTTCTTTAGACATATGTGTATGTCTGCCAAAGTCCCTGCTGCTGTGAGACTTGCAAAGCAAGCATTAATGGAAGATAAGTGTGTGGTCATTGGCCTTCAGAGTACTGGAGAAGCTAGGACGGAGGAAGCTGTGACTAAATATGGTTCTGAACTTGATGACTTTGTTTCGGGTCCTCGAGAATTGCTGCTAAAATTTGTGGAAGAAAATTATCCATTGCCAGAAAAGCCTGAACTTCTCCCAGGAGAGGATGGTGTAAAGGAGCTTCAAAGAAAAAGGCACTTGGCTACTCCTGGTGTTTCTGTAAAAGGAAGGGTTAGAAAACTGCCTAAGTGGCAACCTCCTAGTGATGCTGAGAGTGATGAAGAATCTGAAACTGACTCCGGCCTTGAATCTACTGACTCTGATGATGAGTTTCAGATATGTGAGATTTGCAATATTGAGGAGGAAGGGAAGAAATTGCTTAAGTGTTCCTGCTGTGGTAAATTGGTCCATTCAGAATGCTTGATGCCCCCAGTTATTGATTTAGTTCCTGAAGAATGGGCATGCCATTTGTGCAAGGAAAAAACAGACGAATATCTTCAAAAGAGAAATGCctatattactgaactcctgaAGAGGTATGATGCTGCCATGGAGCGCAAGACAAAAATTTTAGAGATTATTCGTTCTTTGGATCTTCCAAATAATCCTTTGGATGATATTATTGACCAGCTAGGAGGACCTGACAAAGTTGCAGAAATTACAGGAAGGAGAGGCATGCTTGTGAGGGCCCCTGGTGGGAAAGGTGTAACCTATCAGGCTCGTAATACAAAGGATGTCACAATGGAGATGGTCAACATGCATGAGAAGCAACTCTTTATGGATGGTAAGAAGTTAGTTGCTATCATATCTGAAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGAAGAGCTGCAAATCAGAAGAGAAGGGTTCATTTAACTCTAGAACTTCCTTGGAGTGCTGACCGAGCAATTCAGCAGTTTGGAAGAACTCATCGGTCGAATCAAGCTTCGGCCCCAGAATACAGGATACTCTTTACTAATCTTGGTGGAGAACGGCGCTTTGCATCAATTGTTGCTAAGAGATTAGAATCTCTTGGTGCCTTGACTCAAGGGGACCGCAGGGCTGGACCTTCGTTAAGTGCTTATAATTATGATAGTGCTTATGGAAAGAGAGCTCTGATGATTATGTATAAAGGAATAATGGAGCAGGATTCTCTTCCAGTTGTGCCACCAGGATGTATATCTGACCGACCAGACACAATCCAAGACTTTATTATAAAGGCAAAAGCTGCTCTTGTATCTGTTGGAATAGTTAGGGACACGATTCTTGGTAATGGTAAAGATTTTGGAAGGTTATCTGGCCGCATTATTGATTCTGATATGCATGATGTTGGAAGATTCCTTAACCGGCTTTTGGGACTTCCTCCTCAGATTCAGAATAGgttatttgatttatttgtgAGTATCTTGGATCTTCTCGTTCAGAATGCTCGCATTGAAGGTAACCTTGATACTGGCATTCTTGACTTGAGAGCTAATGTTGTAGAACTTCAAGGGACTCCAAAGACTGTTCATGTTGATCATCTGACTGGTGCAACAACTGTTCTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTCTGCAAGTACCATGCTGAATGAAAAGCAAAAGGATGGGCTTGGTTCGACTAATGATGGCTTCTATGAGTCCAAGAGGGAGTGGTTGGGAAGACGTCATTTCATTTTGGCATTTGAAAGTTCTGCTTCTGGTATGTACAAAATAGTTCGCCCCCCAGTTGGAGAGTCACTTCGGGAGATGAACCTGGCAGAATTGAAAAgtaaatatagaaaaatctcTTCTTTAGAGAAGGCTCAAACTGGTTGGGAAGATGAATACGAAGTTTCCTCCAAACAGTGTATGCATGGTCCCAAATGTAAGCTTGGCAACTTCTGTACAGTTGGCAGAAGACTACAGGAAGTGAATGTATTAGGTGGTCTCATTCTTCCAGTATGGGGAACTATAGAGAAAGCCCTTTCTAATCAGGCTCGGCTAAGCCATAGGAGGCTACGTGTTGTACGCATAGAAACAACTACTGATAACCAACGTATAGTTGGTCTCCTTGTACCTAATGCAGCAGTTGAAACTGTGCTTCaagGTTTAGCATGGGTACAAGAAATTGATGATTGA 3771 0.4492 MTQPSVPPPPLAPTHSPPSHAGQGVQVRCAGCRMILTVAPGLTEFACPTCRMPQMLPPELMSRAHQKPSLLPPLPPASSQQTHVPAHGIDPTKIQLPCASCKAILNVPHGLARFACPQCGVDLAVDISKVKQFFPSGPPPEEVNELAVEVERDEDEGGLVGETFTDYRPPKVSIGPSHPDPVVETSSLSAVQPPEPTYDPKIKDDLESSKALSCLQIETLVYACQRHLQHLPSNARAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVGATCIEVHALNKLPYSKLDSKSVGVREGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLVIFDECHKAKNLVPESGSQPTRTGEAVVDIQARLPEARVVYCSATGASEPRNMGYMVRLGLWGAGTSFSDFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYKGAEFEVIEAPLEDEMTDMYKKAAEFWAELRVELLSASAFLNNEKPSSSQLWRLYWASHQRFFRHMCMSAKVPAAVRLAKQALMEDKCVVIGLQSTGEARTEEAVTKYGSELDDFVSGPRELLLKFVEENYPLPEKPELLPGEDGVKELQRKRHLATPGVSVKGRVRKLPKWQPPSDAESDEESETDSGLESTDSDDEFQICEICNIEEEGKKLLKCSCCGKLVHSECLMPPVIDLVPEEWACHLCKEKTDEYLQKRNAYITELLKRYDAAMERKTKILEIIRSLDLPNNPLDDIIDQLGGPDKVAEITGRRGMLVRAPGGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMIMYKGIMEQDSLPVVPPGCISDRPDTIQDFIIKAKAALVSVGIVRDTILGNGKDFGRLSGRIIDSDMHDVGRFLNRLLGLPPQIQNRLFDLFVSILDLLVQNARIEGNLDTGILDLRANVVELQGTPKTVHVDHLTGATTVLFTFILDRGITWESASTMLNEKQKDGLGSTNDGFYESKREWLGRRHFILAFESSASGMYKIVRPPVGESLREMNLAELKSKYRKISSLEKAQTGWEDEYEVSSKQCMHGPKCKLGNFCTVGRRLQEVNVLGGLILPVWGTIEKALSNQARLSHRRLRVVRIETTTDNQRIVGLLVPNAAVETVLQGLAWVQEIDD 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0010 1256 PANTHER OS08G0223700 PROTEIN 22 1256 - -
Sto7g0010 1256 SUPERFAMILY FYVE/PHD zinc finger 649 710 IPR011011 -
Sto7g0010 1256 Pfam C-terminal domain on Strawberry notch homologue 746 1035 IPR026937 -
Sto7g0010 1256 MobiDBLite consensus disorder prediction 1 16 - -
Sto7g0010 1256 ProSiteProfiles Zinc finger PHD-type profile. 655 705 IPR019787 -
Sto7g0010 1256 PANTHER STRAWBERRY NOTCH-RELATED 22 1256 IPR026741 GO:0006355
Sto7g0010 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 420 IPR027417 -
Sto7g0010 1256 MobiDBLite consensus disorder prediction 159 202 - -
Sto7g0010 1256 ProSitePatterns Zinc finger PHD-type signature. 658 702 IPR019786 -
Sto7g0010 1256 Gene3D - 207 407 IPR027417 -
Sto7g0010 1256 MobiDBLite consensus disorder prediction 635 650 - -
Sto7g0010 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 801 906 IPR027417 -
Sto7g0010 1256 Pfam P-loop containing NTP hydrolase pore-1 178 477 IPR039187 -
Sto7g0010 1256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 716 IPR013083 -
Sto7g0010 1256 MobiDBLite consensus disorder prediction 1 22 - -
Sto7g0010 1256 SMART PHD_3 657 703 IPR001965 -
Sto7g0010 1256 MobiDBLite consensus disorder prediction 622 650 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0010 7 137385 181730 Sto7g0010 7 137385 181730 ECH