Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0009 ATGGGCAACGTTTGTAACGCTCAAATTTCCAGAAATGctaaaggagaaggaagaagaagaagcatctCCTCTGATCTAAGAAGCCGAACGGTGCCCCAAATTTCAGCACCACTGACACGGCCGCCGCAAAGAGCTCAAGCGATGTCGAAAGAAGCAAGTTTCAGTAAGAATTCTTCGGGACAGAGCTCCATCGTAGAGAGAAAGCTATCAGCGAAGAAGAAATATGGTTTAATTCCTGATCACTTCGCTACCCTAGATCAGGTTACATCTGCCTTGAGGAAAGAAGGTTTAGAATCATCAAATCTCATCCTTGGAGTTGATTTCACGAAGAGCAACGAATGGACCGGCAAAATGTCATTCAATAATAGAAGCCTGCATGCTATTGGAGGGACACCCAACCCCTATGAGAAGGCCATCTCTATAATTGGCAAGACTTTGGCTCCCTTTGATGATGACAACTTAATTCCTTGTTTCGGCTTTGGTGACGCTACCACTCATGATCAAGAAGTGTTTAGCTTTCATAGTGATCATTCACCCTGCCATGGTTTTGAGGAAGTTCTGGCTTGCTACCAAAAAGTAGTTCCAAACTTGAAACTTTCAGGGCCAACTTCTTACGGTCCAGTGATTGAGGCTGCAATAGACATAGTTGAGAAAAATCGTGGCCAATTCCATGTGTTGGTGATTATTGCAGATGGCCAGgTTACAAGAAGTGTCAACTGTGATGATGGAGAACTCAGTCCTCAAGAAGAGAAGACCATCCAAGCAATTGTTGATGCAAGTTCTTATTCTCTTTCGATCATTCTCATTGGAGTTGGTGATGGACCTTGGGATGACATGAAAAAGTTTGATGACAAGATACCTGCACGCGATTTTGACAATTTTCAGTTTGTTAATTTCACTGGCATTATGTCAAAAAATGCAAGTCCCTCTGAGAAAGAAGCGGCTTTTGCTCTGGCTGCTCTCATGGAGATACCATTCCAGTATAAAGCAGCCGTTGAACTTGGAATACTTGGACGTGTTACGGGAAGGGCAAAGAAAATAGTTCCACGACCTCCTCCAGTTCCCTATTCTCGACCTGCACCACCTGCTCGTGTGCCGAGCAATATTCCAGCATCCACAAACGATGAGCGAAACCAGATGGTATGCCCTATTTGCCTGACAAATGCGAGGGACTTGGCCTTTGGATGTGGGCACATGACTTGCAGAGATTGTGGATCCAGGTTAACCAACTGTCCCATATGCCGAGAGAGGATCACCAGTCGTCTCAGGGTGTTCACTGGATGA 1284 0.44 MGNVCNAQISRNAKGEGRRRSISSDLRSRTVPQISAPLTRPPQRAQAMSKEASFSKNSSGQSSIVERKLSAKKKYGLIPDHFATLDQVTSALRKEGLESSNLILGVDFTKSNEWTGKMSFNNRSLHAIGGTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLACYQKVVPNLKLSGPTSYGPVIEAAIDIVEKNRGQFHVLVIIADGQVTRSVNCDDGELSPQEEKTIQAIVDASSYSLSIILIGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTGIMSKNASPSEKEAAFALAALMEIPFQYKAAVELGILGRVTGRAKKIVPRPPPVPYSRPAPPARVPSNIPASTNDERNQMVCPICLTNARDLAFGCGHMTCRDCGSRLTNCPICRERITSRLRVFTG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0009 427 Pfam Zinc finger, C3HC4 type (RING finger) 379 420 - -
Sto7g0009 427 Gene3D von Willebrand factor, type A domain 103 308 IPR036465 -
Sto7g0009 427 SMART ring_2 382 414 IPR001841 -
Sto7g0009 427 Pfam Copine 124 337 IPR010734 -
Sto7g0009 427 MobiDBLite consensus disorder prediction 1 65 - -
Sto7g0009 427 PANTHER UBIQUITIN-PROTEIN LIGASE RGLG2-LIKE PROTEIN, PUTATIVE-RELATED 45 425 - -
Sto7g0009 427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 370 426 IPR013083 -
Sto7g0009 427 MobiDBLite consensus disorder prediction 349 372 - -
Sto7g0009 427 CDD RING-HC_RGLG_plant 381 425 IPR045317 GO:0061630|GO:0070534
Sto7g0009 427 MobiDBLite consensus disorder prediction 349 366 - -
Sto7g0009 427 PANTHER COPINE FAMILY PROTEIN 1 45 425 - -
Sto7g0009 427 ProSiteProfiles Zinc finger RING-type profile. 382 415 IPR001841 -
Sto7g0009 427 MobiDBLite consensus disorder prediction 26 65 - -
Sto7g0009 427 SUPERFAMILY vWA-like 100 282 IPR036465 -
Sto7g0009 427 SMART VWA_4 99 302 IPR002035 -
Sto7g0009 427 SUPERFAMILY RING/U-box 377 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0009 Sto-Chr7 110910 119507 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0009 7 110910 119507 Sto7g0009 7 110910 119507 ECH