Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1095 ATGGGCGAACTGTATAAAATCAGCTCAATAGATTGGAGGCCTTCTCCAGTAGTATCTTTAGCCACCAGCGTTGATGGCTTGCAGGTCGCCGCCGCTCGCGAAGATGGCTCCATGGAGCTTTGGCTTGTCTCCCCTGGCTCCGTTGGCTGGCACTGTCAGTTGACTATTCAGGGAGACCCTAATACAAGAGTATCTTCGCTTATTTGGTGTCCTGGTGGTTCAAGTGGTATGCCATGTGGTCGATTATTCTCATCTAACATAGATGGGTCAGTTTCTAAGTGGGATCTTTTCCACTTGACGCAGAAGGCTGTGCTAGATTCAGTTGGTGTCTCAATCTGGCAAATGGCATTGGCACCATCTAACCGTGACTTTATTAATACTGAATCAGAGCCTGATCACATTGAGAATGGATATTTGAGTTATAAAGACACTGATCGTGATGAAAGTGAAACCAGTGAAAGTGAAGAAGATTCTGACTCACCTAAGTCTCTCAAGAACTCTGCCTTTGAGTATCCCCGTGTAGCAATTGGTTGTGATGATGGTTGTGTGAGAATATATGCCATCTCTGACTCAGATGAGTTTGTGTATAGGAAATCCTTGCCACGGGTCAGTGGACGAGTTTTGAGTGTGACTTGGAGTACAGATGCTAATTTCATATATTCAGGAAGTAGTGACGGCTTGATAAGATGCTGGGATGCTACATTAGGTCATGAAATCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCAGTGGTCGTGAACTTTGTATATGGTCATTACTGTCCTTAAGGTCTGGGACgctggttagtgcagacagcaGTGGCAGCGTCCAGTTTTGGGATAGTCAGCATGGAACTCTCTTACAAGCACATTCATTGCACAAGGGAGATGTGAATGCTCTGGCTGCAGCACCAACTCATAATAGGGTGTTCTCCGGTGGTTCTGATGGCAAGGTTATACTTTATAAGCTCTCCAGTGAATCAGTTTCATCAGACAATGTTGAGTCATCAACGATGATGAAGAAATGGATTTATGTTGATTATGTAAGGGCACACACACATGATGTCCGGGCCTTGACTGTGGCAGTGCCAATTAGTCGAGAAGGCTTATGGCCAGCAGATTCCTTGCCGGATGAGAAGACTAAAAGAGCTCGTCGTGAAGAAAAACCTGTTGATTTTAGTTACCATAAATGGGCCCATTTGGGGGTTCCCATGCTGATATCAGCTGGCGATGACACAAAACTATTTGCATATGCTGTGAAGGAGTTTACTAAGTTCTCTCCACATGACATATGCCCTGCACCGCAGAGGACACCCATTCATGTAGTGCTTAAAACAGCTTTCAATCAATCAGCAATGCTTTTAGTCCAGTCTTCACATCGTTTAGATATTCTTTCTGTACAACTGAAAAAAGGTCTCTTTCCTGATGTAACACGTCGCACTACCGGAGGCTTTGCAAAAACTGATCTGATTGCTCAAGTTAAGAGTAAGTCATCTCGGAAGATAATTTGCAGCACCATTGCTAATTCAGGGGAGCTATTTGGATACTCTGATCATGTGAAGCCTAGTCTATTTGAATTGAAGAGGTctgaagttgggaaaagtacaTGGAGTGTTAGTAAAAGGCAACTACCTCATAGACTACCCTTTGCTCATTCGATGATTTTTACTCAAGATTCCTCTCGGCTGATAGTAGCTGGGCATGATAGAAGGATATATGTTGTGGATGTGAGCAGTTTAGGAGTTATGCATGCCTTTACCCCGTCTCGAGAGATGCAAGATGAGGAATTACCTCCAACCGAACCTCCCATAACAAGATTGTTTACCAGTTCTGATGGACAGTGGTTGGCAGCCGTGAATTGTTTTGGAGATATTTATGTATTCAATCTGGAGATACTAAGgcAGCACTGGTTCATTTCAAGATTAGACGGTGCCTCTGTTACAGCTGGTGGATTTCCTCCCCAGAACAACAATGTACTTATAGTTACAACTTCCTCAAATCAAGTGTATGCACTGGACATAGAGGCCAAGCAGTTGGGAGAATGGTCAATGCGGAATACATTTGTTCTTCCAAGGAGATTCCAGGAATTTCCTGGTGAACTTATTGGGCTCTCATTCCCTCCCTCGTCAACTTCATCTTCCGTCGTTGTTTACAGCGCCAGGGCAATGTGCTTGATCGACTTTGGGTTACCTGTGGAGAAACATAAACAACATAGgaagaattttgaaattttgcaaTTTAGGGATCCTGTTTTATTTTTAGCACATCTCTCAAAAAGTTCCTTCTTATTAATAGACAAACCCTGGTTAGAAGTTGTTAAAGGTTTAGAAGCCGCACCAGTCCACAGACATATTTTTGGGACATAA 2367 0.4242 MGELYKISSIDWRPSPVVSLATSVDGLQVAAAREDGSMELWLVSPGSVGWHCQLTIQGDPNTRVSSLIWCPGGSSGMPCGRLFSSNIDGSVSKWDLFHLTQKAVLDSVGVSIWQMALAPSNRDFINTESEPDHIENGYLSYKDTDRDESETSESEEDSDSPKSLKNSAFEYPRVAIGCDDGCVRIYAISDSDEFVYRKSLPRVSGRVLSVTWSTDANFIYSGSSDGLIRCWDATLGHEIYRITAGLGGLGSGRELCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPTHNRVFSGGSDGKVILYKLSSESVSSDNVESSTMMKKWIYVDYVRAHTHDVRALTVAVPISREGLWPADSLPDEKTKRARREEKPVDFSYHKWAHLGVPMLISAGDDTKLFAYAVKEFTKFSPHDICPAPQRTPIHVVLKTAFNQSAMLLVQSSHRLDILSVQLKKGLFPDVTRRTTGGFAKTDLIAQVKSKSSRKIICSTIANSGELFGYSDHVKPSLFELKRSEVGKSTWSVSKRQLPHRLPFAHSMIFTQDSSRLIVAGHDRRIYVVDVSSLGVMHAFTPSREMQDEELPPTEPPITRLFTSSDGQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNNNVLIVTTSSNQVYALDIEAKQLGEWSMRNTFVLPRRFQEFPGELIGLSFPPSSTSSSVVVYSARAMCLIDFGLPVEKHKQHRKNFEILQFRDPVLFLAHLSKSSFLLIDKPWLEVVKGLEAAPVHRHIFGT 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1095 788 MobiDBLite consensus disorder prediction 126 148 - -
Sto5g1095 788 SUPERFAMILY WD40 repeat-like 10 248 IPR036322 GO:0005515
Sto5g1095 788 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 332 IPR001680 GO:0005515
Sto5g1095 788 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 241 IPR001680 GO:0005515
Sto5g1095 788 Pfam WD domain, G-beta repeat 207 232 IPR001680 GO:0005515
Sto5g1095 788 MobiDBLite consensus disorder prediction 124 165 - -
Sto5g1095 788 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 232 - -
Sto5g1095 788 SMART WD40_4 147 187 IPR001680 GO:0005515
Sto5g1095 788 SMART WD40_4 541 576 IPR001680 GO:0005515
Sto5g1095 788 SMART WD40_4 284 323 IPR001680 GO:0005515
Sto5g1095 788 SMART WD40_4 243 281 IPR001680 GO:0005515
Sto5g1095 788 SMART WD40_4 3 42 IPR001680 GO:0005515
Sto5g1095 788 SMART WD40_4 193 232 IPR001680 GO:0005515
Sto5g1095 788 SMART WD40_4 49 95 IPR001680 GO:0005515
Sto5g1095 788 Gene3D - 3 130 IPR015943 GO:0005515
Sto5g1095 788 Gene3D - 131 264 IPR015943 GO:0005515
Sto5g1095 788 Gene3D - 265 469 IPR015943 GO:0005515
Sto5g1095 788 SUPERFAMILY WD40 repeat-like 172 675 IPR036322 GO:0005515
Sto5g1095 788 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 737 IPR044622 GO:0010073|GO:0035266
Sto5g1095 788 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 735 788 IPR044622 GO:0010073|GO:0035266
Sto5g1095 788 Gene3D - 524 745 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1095 Sto-Chr5 7370213 7375262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1095 K14548 - jre:109001109 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1095 5 7370213 7375262 Sto5g1095 5 7370213 7375262 ECH