Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1083 ATGTATGGACGTAAGAGTAATAAAAATGCAAAACCTACGGTTTTAACAAATATTCTGCACAAAAAAGGCAATAAAGTATTTTGCATCTACGCTCTTCCTTCATCTTCAGATGAACTTCAAAATTTCGTCCCCACTTTGAAAGTGACAGAAGAAGCTGCTTCGCTTCTGGTTTTTATTTTGTTGCCTttttcaccatatatatatatatatatatatatatgttatgtgcgTAACCAAAATGACTTctgCTACCTCCGGCTtagttttccttcttcttcttcttcttcttcagccaTGATGTTCTTCCACGACGAGGCGGTCCAGTTCCCATCATGTCCACTTCTTACGCCGAGTGACATAGAGGAGTTGATGTCCCTCGTTCAAGCCGCAGATCCGGCCAGTCCAAGCTCCGGTTCGCAAGGATCAAACCGGGCGGTGGACGAGAGAAAGCGCAGGCGCATGCTGTCGAACCGGGAGTCGGCCCGGCGGTCCAGATGGAGAAAGAAGCGGCATTTAGAGAACGTGACGAACCAAGTGAACCGCTTGAAAAGCGAAAACCGAGAACTCAAAAGCCGCCTTGCCCTCACACTTCATCAGCATCTCCTAGTTTCCCTAGAGAATGCGGGCCTAAGATCCGAATCCGTTACCCTCCTGACCAGGCTTTCGGATCTATATCGGGTCTTAGGCTCCAATACCTTCCATTCACAATAG 711 0.429 MYGRKSNKNAKPTVLTNILHKKGNKVFCIYALPSSSDELQNFVPTLKVTEEAASLLVFILLPFSPYIYIYIYICYVRNQNDFCYLRLSFPSSSSSSSAMMFFHDEAVQFPSCPLLTPSDIEELMSLVQAADPASPSSGSQGSNRAVDERKRRRMLSNRESARRSRWRKKRHLENVTNQVNRLKSENRELKSRLALTLHQHLLVSLENAGLRSESVTLLTRLSDLYRVLGSNTFHSQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1083 236 MobiDBLite consensus disorder prediction 144 161 - -
Sto5g1083 236 CDD bZIP_plant_GBF1 150 200 IPR045314 GO:0003700|GO:0006355
Sto5g1083 236 Pfam bZIP transcription factor 149 193 IPR004827 GO:0003700|GO:0006355
Sto5g1083 236 Coils Coil 172 199 - -
Sto5g1083 236 SMART brlzneu 145 209 IPR004827 GO:0003700|GO:0006355
Sto5g1083 236 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 152 167 IPR004827 GO:0003700|GO:0006355
Sto5g1083 236 MobiDBLite consensus disorder prediction 130 170 - -
Sto5g1083 236 PANTHER BZIP TRANSCRIPTION FACTOR 114 230 - -
Sto5g1083 236 Gene3D - 147 200 - -
Sto5g1083 236 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 147 194 IPR004827 GO:0003700|GO:0006355
Sto5g1083 236 PANTHER BZIP TRANSCRIPTION FACTOR 44 114 230 - -
Sto5g1083 236 SUPERFAMILY Leucine zipper domain 149 200 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1083 Sto-Chr5 7300499 7301640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1083 113 224 bZIP Transcription Factor Family AT4G37730 42.308 2.58e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g1083 bZIP_1 1.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1083 - - gmx:102668006 160.614