Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1077 ATGGATCTTGTGGCGGTGGGTTTGGATGGGCTGGTGGGTTCAGACACTTCTACTAATACTAATGCTACTACCACTGGTGGGTTTGGTTCTCTAGCTTCAGATCCTGAGACAAAGCAGAAGTGGTACGGATCTGGATTCCTTAAGCAGGAGAGATCTGGCACACCCTGTGAAGATGAGTGGAGGAGTTCTAAACTCCCCAAGACTGATGACATCTCTGCCTCCAAAGCAATGCTCTTTCACCATAGAAACTCCCTCCTTAGATCtaactcttctcttttctctgatGCCCAAATGCTCAGCTTCTCCTCTCCTAAAGCTGATCCTCTTCTCTCCGACACCAAGTCCTCCCCCAATCCCACATTGCCCTTCTCTTTTCACCCTTTAACTCCTTACACCAGAAATACAGGTTACAGCAGTGGAAACATGCATGGGGTTATAACCGCAACCAGAGGGCCATTCACCCCGTCGCAGTGGATGGAGCTGGAACACCAAGCCTTGATCTACAAGTACATCAATGCAAATGTACAAGTACCAACCCATCTGCTCATTCCTATCAGAAAAGCTCTTGATTCTGCTGGGAAACAGGGGACATTAGATTCAATTGCGTTTTCCTTTTTGGGTGTTGTTGTAGTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACGGATCCTGAGCCAGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTTGTGGACCAGAAGTATTGCGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCAAGCCGCCGTTGTCACCGGCggcgccaccaccaccaccgccaccactaCTACAAATGCTACAACAACCACTAATATCTCCGCAGCATCCAAGCTCATGCCGAATGCTTCGTCCTCTGTGTCGGTAGTGGTGCCAGGCAACGCTGCATCCAACACTCTTACCTTTGCACACCATCAATCCAAGAATTTGCAGCCTCTTGCATCTGATACTTCTGCCCCCAACAACATCAATAGGATGTTTATGAATAACAAGGAGAATGCGAGTGAGAGAATGCAGGACAGTTCTGCTCTTCCTATGCTGCCTCCCACTCTTGATCTGAAACCCAAGGAAAAGAACCCATTTATGATTCACAAAGATCAAATGGCATATGAGGAATCCTCAAGGAGTGAGTTTGGGCTGGTCACTTCTGATTCTCTACTCAACCCTTCACAGAAAAACTCCTCCTTGTTGAGTAGCAGAAGCTTTGGTTCTTCGCAAAACCCCGCTGATCGAGAGACTCATCACGATTCTCAACAATCCCTTCGCCATTTCATCGACGATTGGCCTAAAAATCAATCTGATCGCGCTGGCATTTCATGGCCCGAACTTGACATGCAATCAGAGAGGACACAGCTCTCAATTTCCATCCCCATGACATCTCCAGATTTCATGTCATCCACATCCTCTCCCAGCAATGAGAAGGTGACATTGTCACCACTGCGACTGTCGAGGGAGCTAGACCCGATCCAAATGGGATTGGGCGTGGGAAGTGGTATGAATGAATCATGTAATAGGCAGGCTAATTGGATTCCAATTGCTTGGGAGAGTTCTATGGGTGGTCCTCTTGGGGAGGTTCTTCATCTTAGTAACAACAATTCAAGTGAGTGCACCAAGAATTCATCTGCCCTTAACCTCATGACAGATGGGTGGGACAGTAGTCCTCCACTAGGGTCATCTCCCACTGGGGTTCTGCAGAAGGCCGCGTTTGCATCGCTAACCAATAGCAGCGCCGGAAGCAGTCCTAGGGCCGAAAATAAGACGGCGGAAGGCGCCAGCTTGTGCAATGACCTCCTTGGATCCACTCTAGGGAGTTCATCCTCCTCCTTGCCCAACTTGTAA 1914 0.4786 MDLVAVGLDGLVGSDTSTNTNATTTGGFGSLASDPETKQKWYGSGFLKQERSGTPCEDEWRSSKLPKTDDISASKAMLFHHRNSLLRSNSSLFSDAQMLSFSSPKADPLLSDTKSSPNPTLPFSFHPLTPYTRNTGYSSGNMHGVITATRGPFTPSQWMELEHQALIYKYINANVQVPTHLLIPIRKALDSAGKQGTLDSIAFSFLGVVVVGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGQAAVVTGGATTTTATTTTNATTTTNISAASKLMPNASSSVSVVVPGNAASNTLTFAHHQSKNLQPLASDTSAPNNINRMFMNNKENASERMQDSSALPMLPPTLDLKPKEKNPFMIHKDQMAYEESSRSEFGLVTSDSLLNPSQKNSSLLSSRSFGSSQNPADRETHHDSQQSLRHFIDDWPKNQSDRAGISWPELDMQSERTQLSISIPMTSPDFMSSTSSPSNEKVTLSPLRLSRELDPIQMGLGVGSGMNESCNRQANWIPIAWESSMGGPLGEVLHLSNNNSSECTKNSSALNLMTDGWDSSPPLGSSPTGVLQKAAFASLTNSSAGSSPRAENKTAEGASLCNDLLGSTLGSSSSSLPNL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1077 637 Pfam WRC 226 268 IPR014977 -
Sto5g1077 637 MobiDBLite consensus disorder prediction 409 433 - -
Sto5g1077 637 MobiDBLite consensus disorder prediction 275 290 - -
Sto5g1077 637 MobiDBLite consensus disorder prediction 257 290 - -
Sto5g1077 637 MobiDBLite consensus disorder prediction 409 445 - -
Sto5g1077 637 ProSiteProfiles WRC domain profile. 225 269 IPR014977 -
Sto5g1077 637 Pfam QLQ 152 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto5g1077 637 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto5g1077 637 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto5g1077 637 PANTHER - 33 615 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto5g1077 637 PANTHER GROWTH-REGULATING FACTOR 9 33 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1077 Sto-Chr5 7274464 7277360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1077 39 595 GRF Transcription Factor Family AT2G22840 40.760 2.86e-102 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sto5g1077 WRC 6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1077 - - aprc:113865097 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1077 5 7274464 7277360 Sto5g1077 5 7274464 7277360 ECH