Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1068 atgattaatttagGGATTTTATTTGACATCAAGTTATGTCGTGGTGTGCAATTATGCATTGTCCGCGTGAGCAAGGGAAGCGAGAGGCCTATAAAGAATGTCCAAACCAAAAGTTTCTCGAGTTCCGTTGAGCAACTAAAACTTGGAAAACTTCCAAGGCGGCCAGCGAAGCCAAACAGGGAAGAAAAGCCAAGAGAGCCAACGCCAtcgtcgccgccgccgccgtaCTTGTCCGTCGTCGTCATATCCGAGAGGAAGAACCGTAATGTTCCTTCCGAGGCTCCCTCGCAATGCATGAAAAGCATAACCACCGCTACGGGAGAATGCAGATCCGCTACCGGCGGTGGCGACGTTGACGTTGATGTTATAATCGTTGGAGCTGGTGTTGCCGGCTCAGCTCTCGCTCACACTCTTGGCAAGGATGGACGCCGAGTTCATGTTATAGAAAGAGATCTAACTGAGCCTGACCGAATTGTTGGGGAATTATTACAACCAGGGGGCTATCTCAAATTAATTGAACTTGGAATGGAAGATTGTGTGCAGGAAATTGATGCTCAGCAAGTGTTTGGCTATGCTCTTTTCAAGGATGGGAAAAATACTCGACTCTCTTATCCATTGGAGAAGTTTCACTCGGATGTCTCTGGGAGAAGCTTTCACAATGGGCGTTTTATTCAGAGAATGAGGGAGAAGGCTGCCTCCCTTCCAAACGTACGAATGGAACAAGGAACTGTTACTTCCCTACTTGAAGAGAATGGGACAATTAAAGGGGTGCACTACAAGACCAAAGACGGACAGGAGTTTGCAGCATATGCTCCTCTTACTATTGTTTGTGATGGCTGTTTCTCAAACTTGCGTCGTTCTCTTTGTAATCCTAAGGTAGACGTTCCCTCTTGTTTTGTTGGTTTGATTTTGGAGAACTGTGAACTTCCATATGCAAACCACGGGCATGTTATACTGGGAGATCCTTCACCAATTTTATTCTATCCTATTAGTAGTACTGAGATTCGCTGTCTGGTTGACGTACCTGGTCAGAAGGTTCCTTCAATTTCAAACGGTGAAATGGCCAAGTATTTGAAGACAGTGGTAGCTCCACAGGTTCCCCCTGAGCTCTATGATGCCTTCATAGCAGCAGTCAACAAAGGCAACCTGAGGACAATGCCAAACAGAAGCATGCCGGCAGCTCCTTATCCTACTCCCGGTGCCCTTTTGATGGGAGATGCATTCAACATGCGTCATCCTCTAACTGGAGGAGGAATGACTGTGGCCCTGTCTGATATAGTGGTGCTGAGGAACCTTCTCAGGCCTTTGCGTGACCTACATGATGCATCCACACTCTGCAAATATCTTGAATCCTTTTATACCTTGCGAAAGCCCGTGGCATCCACCATAAATACGTTGGCAGGAGCCCTTTACAAGGTTTTTAGTGCATCTCCTGATCAGGCGAGGAGTGAAATGCGCCAAGCATGCTTTGATTATTTAAGTCTTGGGGGTGTATTCTCGGAAGGACCAATCTCTTTACTTTCAGGATTAAACCCTCGTCCCCTAAGCTTGGTTCTCCATTTCTTTGCTGTTGCAATATACGGTGTAGGCCGTTTGTTGATACCATTTCCCTCACCTAATCGGGTTTGGATAGGAGCACGATTAATATCTGGTGCTTCAGCAATCATCTTCCCCATAATTAAAGCAGAAGGAGTTCGTCAGATGTTCTTCCCAGCCACCGTTCCCGCTTATTACAGAACTCCTCCGTCCAAACAAGAGTGA 1761 0.4566 MINLGILFDIKLCRGVQLCIVRVSKGSERPIKNVQTKSFSSSVEQLKLGKLPRRPAKPNREEKPREPTPSSPPPPYLSVVVISERKNRNVPSEAPSQCMKSITTATGECRSATGGGDVDVDVIIVGAGVAGSALAHTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGMEDCVQEIDAQQVFGYALFKDGKNTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVRMEQGTVTSLLEENGTIKGVHYKTKDGQEFAAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPYANHGHVILGDPSPILFYPISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVVAPQVPPELYDAFIAAVNKGNLRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLRDLHDASTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSPNRVWIGARLISGASAIIFPIIKAEGVRQMFFPATVPAYYRTPPSKQE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1068 586 MobiDBLite consensus disorder prediction 34 76 - -
Sto5g1068 586 Pfam NAD(P)-binding Rossmann-like domain 124 150 - -
Sto5g1068 586 Gene3D - 115 499 IPR036188 -
Sto5g1068 586 MobiDBLite consensus disorder prediction 50 67 - -
Sto5g1068 586 Pfam Squalene epoxidase 271 543 IPR013698 GO:0004506|GO:0016021|GO:0050660
Sto5g1068 586 SUPERFAMILY FAD/NAD(P)-binding domain 119 494 IPR036188 -
Sto5g1068 586 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 121 143 - -
Sto5g1068 586 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 270 285 - -
Sto5g1068 586 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 398 413 - -
Sto5g1068 586 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 413 429 - -
Sto5g1068 586 PANTHER SQUALENE MONOOXYGENASE-RELATED 84 584 - -
Sto5g1068 586 PANTHER SQUALENE MONOOXYGENASE 84 584 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1068 Sto-Chr5 7204289 7209138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1068 100 586 Miscellaneous Gene Families AT1G58440 80.287 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1068 K00511 - qsu:111985237 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1068 5 7204289 7209138 Sto5g1068 5 7204289 7209138 ECH