Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1067 ATGACGAAGGACGACGACGCAGTTGATCGAAAACAAGGTAATCCCTGGCCGTCGAGGAACGAGACTTATCAGGGGAAAGCCGAACACGATGCGAAGCTTTGGGGAGTTGTCCTCTTCGGCTTAATTGGCGCCACCGTCACTACCTTCGcgGTTGTTCAGCTGCGGAGGAATGTTGACTGGTTCTATGCACAGATGTCCAGGTCACAAACATCAAGGAAAGGAGGGATGGGCCGTTCTTTCCGATCAGCTTTTCAGGAAGAAGCACGGAAAAGGTACAATAAGCGACTTCAAGAAGAGTATGAAGAGGAGATGGAGAGAGTGGAACGTATAAGACGCATGCAAAGTGTATTTAACAGGGAAAGGAATAAATACAAAAGAAGCTATGAGAACTGGAGGGAATATGGTCCCGGTGCATATCATCAACATTTCCAGAGAGACGATTGGTATTGGAAGACTGATACATCCAACAGAGATTGGAGAACCAATTATCGAGAAACTCCAAGAGAATCTGGAAGCTATTCATTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAGCAATGCCATATACAGATGCTGAGATTAAGAAAGCTTTTAGGACCAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAACAAAGAGGCTGCAGAAGCAAAATTCAAAGAGGTAATGAGTTCCTATGAGGCCATAAAACAAGAAAGGAAGAATCAGAATCTGTAA 732 0.4413 MTKDDDAVDRKQGNPWPSRNETYQGKAEHDAKLWGVVLFGLIGATVTTFAVVQLRRNVDWFYAQMSRSQTSRKGGMGRSFRSAFQEEARKRYNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRSYENWREYGPGAYHQHFQRDDWYWKTDTSNRDWRTNYRETPRESGSYSLSHHYSVLGLDRFRAMPYTDAEIKKAFRTKAKEYHPDQNQDNKEAAEAKFKEVMSSYEAIKQERKNQNL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1067 243 MobiDBLite consensus disorder prediction 1 24 - -
Sto5g1067 243 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 241 - -
Sto5g1067 243 SMART dnaj_3 176 239 IPR001623 -
Sto5g1067 243 Coils Coil 93 113 - -
Sto5g1067 243 Gene3D DnaJ domain 155 243 IPR036869 -
Sto5g1067 243 ProSiteProfiles dnaJ domain profile. 177 239 IPR001623 -
Sto5g1067 243 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 241 - -
Sto5g1067 243 Pfam DnaJ domain 178 241 IPR001623 -
Sto5g1067 243 PRINTS DnaJ domain signature 201 216 IPR001623 -
Sto5g1067 243 PRINTS DnaJ domain signature 219 239 IPR001623 -
Sto5g1067 243 Coils Coil 217 237 - -
Sto5g1067 243 CDD DnaJ 178 232 IPR001623 -
Sto5g1067 243 SUPERFAMILY Chaperone J-domain 176 241 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1067 Sto-Chr5 7195556 7198813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1067 178 242 Miscellaneous Gene Families AT5G49580 40.000 3.81e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1067 - - rcu:8265248 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1067 5 7195556 7198813 Sto9g3468 9 34059281 34062476 CCT
Sto5g1067 5 7195556 7198813 Sto5g1067 5 7195556 7198813 ECH