Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1057 ATGGATTTTATGAAGGTCTTCGATCAGACTGTTCGAGAAATAAAGAGAGAGGTGAACCTGAAGGTACTTAAAGTTCCCGAAATTGAACAGAAGGTATTGGATGCTACTGACGATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAGATTGCACAAGCTACCAAAAAAGTTTCGGAGTGTCAAATGGTCATGAATGTCCTTTGGACAAGATTGAGTGAGACTGGAAAGGATTGGCGTTATGTATACAAGGCATTATCTGTTATAGAGTATTTGGTAGCACGTGGATCTGAGCGAGCAGTTGATGACATTATAGAGCATACTTTTCAGATATCTGCTCTTTCCAGTTTTGAATATGTTGAACCTAGTGGGAAGGACATGGGAATCAATGTCAGGAAGAAGGCAGAAAATATAGTAGcccttttaaataataaagataagATACAAGAAGCCAGAAATAAAGCAGCGGCAACCCGTGATAAGTATGCCAAATTTGTcaatactaagtactttggACTTTCCTCCACTGGAATTAGCTATAAATCTGGTTCAGCCTCATCGAGCAGTGATAGATATGGAGGCTTTGGTTCGAATGATAGTGACAAATATAGGAGCAGTTATAGAGACAAGGGTAACTATGAAGAAGGAAGAGATGAGAAAGACTTCCCTAAAAAATCATCTCACGGAGTCACAAGTGGCTATCAAGGAAGCGACTTCAAGAAGGGTTATCTGCACTCTGTCAGCAAAAGTCAGAATAGTAAGTCATCTAAAGTATCAAATTCATCTACCAATGTAAAGGACTATGATAACTACAATTCAGTTCACTCGCAAACTTCAAGTTTACCTGAAAACAATATTGAGGATGATTTTGATGATTTTGATCCAAGAGGAACTTCTACTACTAAGGCTTCAGCTGGAAGCTCTAACCAGGTTGATCTCTTTGGGCAAGATTTAATTGGTGACCTCATAGATGCTCCGACTTCTATTCCTACTGAGAATCCTGCAACAAATAATGTATCAGAGGTCAATCTGTTTGCTGATGCTACATTTGTAACAGCAGGACCACATGAGAAAAAAGAAGCTACTTCTCAACCACTGAACGAGGTTGACCTATTTACTTCCCGGCCAGCCATTCCTTCTTCAATAACGTCAACAGTTGACTTGTTTTCCATTCCTGAACCAGCTGTACAGCCAGATAGCAAATCTGAAAACTCTACACTTGAAAAAAATGACATTGATCCTTTTGCTGCTGTTCCACTTAATAAGTTTGAGGGATCTGATATGTTTGGTGAATTCAATTCTCATTCTGATACAGTAACTTCACATCCCTCAAAAAGTCCTATAAGTGATGGCAACCATAATAATATGAATGGTATCTCTTCACCGGAGTCTAAAATTCCTCCTAAAAAGGACCCTTTTCAGGTGAAGTCTGGTATTTGGGCAGATTCACTAAGCCGTGGATTGATTGATCTCAATATATCTGCTCCCAAGAAGGTATCGCTGGTAGACGTTGGCATTGTGGGTGGATTAAGTGAGGGATCTGATGAAAGGGAGAAAGGGCTACCCCCAGCATCGTATTCCATGGGAAGAGCTATGGGATCAGGTTCTGGTCTGGGTAGGTCTGGAATTGCAGCAACTTCACAGCCAGCAGGCGGAAACGATATTTTCTCAAACTTCACCAGCCAACAATATCAATTTGGTGGCTTACAAAAGTAA 1716 0.3998 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGSALAEIAQATKKVSECQMVMNVLWTRLSETGKDWRYVYKALSVIEYLVARGSERAVDDIIEHTFQISALSSFEYVEPSGKDMGINVRKKAENIVALLNNKDKIQEARNKAAATRDKYAKFVNTKYFGLSSTGISYKSGSASSSSDRYGGFGSNDSDKYRSSYRDKGNYEEGRDEKDFPKKSSHGVTSGYQGSDFKKGYLHSVSKSQNSKSSKVSNSSTNVKDYDNYNSVHSQTSSLPENNIEDDFDDFDPRGTSTTKASAGSSNQVDLFGQDLIGDLIDAPTSIPTENPATNNVSEVNLFADATFVTAGPHEKKEATSQPLNEVDLFTSRPAIPSSITSTVDLFSIPEPAVQPDSKSENSTLEKNDIDPFAAVPLNKFEGSDMFGEFNSHSDTVTSHPSKSPISDGNHNNMNGISSPESKIPPKKDPFQVKSGIWADSLSRGLIDLNISAPKKVSLVDVGIVGGLSEGSDEREKGLPPASYSMGRAMGSGSGLGRSGIAATSQPAGGNDIFSNFTSQQYQFGGLQK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1057 571 MobiDBLite consensus disorder prediction 249 307 - -
Sto5g1057 571 MobiDBLite consensus disorder prediction 202 226 - -
Sto5g1057 571 Gene3D - 24 165 IPR008942 -
Sto5g1057 571 MobiDBLite consensus disorder prediction 249 284 - -
Sto5g1057 571 MobiDBLite consensus disorder prediction 181 201 - -
Sto5g1057 571 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Sto5g1057 571 SMART enth_2 26 152 IPR013809 -
Sto5g1057 571 MobiDBLite consensus disorder prediction 540 556 - -
Sto5g1057 571 MobiDBLite consensus disorder prediction 511 556 - -
Sto5g1057 571 PANTHER EPSIN/ENT-RELATED 1 562 - -
Sto5g1057 571 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Sto5g1057 571 Pfam ENTH domain 27 147 IPR013809 -
Sto5g1057 571 CDD ENTH 28 144 - -
Sto5g1057 571 MobiDBLite consensus disorder prediction 181 237 - -
Sto5g1057 571 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 562 IPR033521 GO:0006623|GO:0030276
Sto5g1057 571 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1057 Sto-Chr5 7097197 7102003 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1057 K12471 - gmx:100809198 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1057 5 7097197 7102003 Sto5g1057 5 7097197 7102003 ECH