Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0149 ATGGACCGGCGGTGGCCCTGGAAGAAAAAATCATCTGACAAGGCGGTGCTTGAGAAAGCAGCTGCTGCATTGGACAACTACAAAAAGCCAAATTATGTCCAAATTTCTGTGGAGTCATATTCACATCTGTCTGGTTTGGAGGATCAAGTGAGGACGTATGAGGAAAAAGTTCAGACTCTGGAGGATGAGATCAAGGAACTGAATGATAACCTGTCAGCAGCAAATTCAGAGATGACTACCAAAGAAAACCTTGTGAAACAacatgctaaagtagcagaagAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAGGCTTTGTCATTGAAGAATCATCTAGAATCTGTCACTCTTGCCAAGCTCACTGCTGAGGATCGTGCATCGCATTTAGATGGTGCTCTTAAAGAGTGCATGCGGCAAATAAGAAATCTGAAGGAAGAACACGAACAGAAAATACAAGAAGTCGCTCTCTCTAAAACCAAGCAATTGGACAAGATTAAGGGAGAGCTTGAGGCAAAGATAGATAACTTAGAACAGGAACTCCTAAGATCAGCTGCTGAAAATGGAGCACTTTCAAGGTCCTTGCAGGAGCGCTCTAACATGCTAATTAAAATAAGCGAAGAAAAAGCTCAGGCTGAGGCTGACATCGAGCTTTTAAAGAGCAACATAGAATCATGTGAAAGAGAAATTAATTCACTTAAATATGAACTTCATGTTGCTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGATCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTCAAAAAAATTGCCAAGTTAGAAGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGTAAAAAGTTGCCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAGAGTCTTGGCCGAGATTATGGAGACAGTAGATTAAGGAAGTCTCCTGTCAAGCCTGCTAATCATCATATGCCATCTTTGCCCGAGTTCTCCACAGAAAATGTACAGAAATTCCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGGTAATGGAGGAAGAAACTAAGATGCTCAAAGAAGCTTTGGCTAAACGCAACAGTGAATTGCAGGCTTCAAGGAGCATGTGTGCAAAAACCCTGTCCAAACTTCAAAGTTTGGAAGCACAAATTCAAACATGTAACCAGCAGAAAGGATCTCCAAACTCCATCATCCGAATGACACATGAAAGTATTTACAGTCAAAATGCAAGCTATGCACCAAGCATAACATCTATGTCTGAAGATGGAATTGATGATGTAGGTAGTTGTGCCGAGTCTTGGGCCACAGCATTAGTCTCTGAgctttcccaatttggaaatcaAAAGAATACTGAGAAGTCAAGCAAATCTGAAGTCACTAATAAGTTGGAGCTAATGGATGACTTTCTGGAGGTAGAGAAATTGGCTCGTCTATCAAATGATTCCAACACAGATACCCCTGCTTCAGTTTCTCCAAGCAAAAAGACATCTGAAATTGCGACCAATGATGTATCTGAAGTCAATAATAGCAAAGATGATTCTTCTGAGAAACAGATTGTTTCAAATCCATTGCTAAATGAAGTGTGTTCGGATGCAATATTGTCAGCGCCAGATCCTGGATCTGATGTTGATGTCTCCTCATTGACAGAGCTTCGATCAAGAATATTGGTGGTTTTTGAGTCCATGTCTAAGGATGCTAATGCAGAACATGTGCAGATGAATTCAAATTTAGAAACTGCGATCTCTCAGATTCATGACTTTGTATTGTTCCTAGGCAGAGAAGCAATGGCAGTTCATGACATGTCTTCTAATGGAGATGGAATGAGCCAAAAGATTGAGGAATTCTCCATCACTTTTAATAAAGTTCTTCGCAATGAAACAAGTTTGTTGCAGTTTGTTCTTGATCTGTCTTGTGTTTTAGCCAGAGTGAGTGAATTCAAATTCAATGTCCTTGGCTACAAGGGCACAGAAGCTGAAAATAACAGTCCTGATTGCATAGACAAGATTGCTTTGCCAGAAAATAAGTTAGCTCAAGATAATTCACCAGGAGAGAGATATCAAAATGGTTGTTCCCATATTCTTAATCCTTGTTCTGATCTGGAGGTTCCTGATGATGGAAATGTGGTCTCAGGCTATGAACCAAATGCCACATCCAAAAAATTCTCCGTGGAGGAGTTTGAAGAGTTGAAATTAGAAAAAGAGAAGGCTGCAATGGATCTGTCAAGATGTAATGAAAATCTTGAAATGACGAAGTCTCAATTACAGGAGACTGAGCAACTTCTGGCTGAAGTTAAATCACAATTGGCATCAGCTCAAAATTCAAACAGCTTAGCTGAGACACAGCTGAAATGTATGGCAGAGTCATACAGGTCTCTTGAAACACGTGCACATGAGTTAGAAACTGAGCTGAATCTTCTACGAGCTAAGACAGAAACATTGGAGAATGAACTTAGAGATGAGAAGAGAGATCATGAAGATGCTTTGGCAAAGTGTAAGGAGCTAGAAGAGCAATTACAAAGGTTTGATGCCCATCCAATATCATATTGGTTATTAAACGTTTGTTCTATTTCTAATGAGAGAGATTTAGCTGCTGCTGCTGAGAAGCTAGCTGAATGTCAGGAAACCATCTATGTTCTTGGTAAGCAGTTGAAAGCTCTGCATCCTCAAACAGAGCAAATTGGATATCCATACAGTGAAAGAAGTCCCAAGGGTGAAGGCTTCATGGAGGATGAACCTACTACCAGTAGCCCAAATTTGCAAGAGTTAGATCAGGGTGAGATGGACAATGCTACTTCTCCTTATTTGCAGAAACTGGGTATAGGTTCGCCCTTGCATTCTTCCAACAATGAATGTAGTCCCTCAGATAATGAATCAAACCTTCCAGACCGATCTCCAGTAAGACCTCCAAAACACAGGCCTACCAAGTCAAACTCCTCATCGGCCTCCTCCACTCCTACGCCTGAGAAACATGCAAGAGGGTTTAGCAGATTCTTTTCATCGAAAGGAAAGAATGGTCACTGA 3051 0.4058 MDRRWPWKKKSSDKAVLEKAAAALDNYKKPNYVQISVESYSHLSGLEDQVRTYEEKVQTLEDEIKELNDNLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLAKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIDNLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEADIELLKSNIESCEREINSLKYELHVASKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGDSRLRKSPVKPANHHMPSLPEFSTENVQKFQKENEFLTERLLVMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQIQTCNQQKGSPNSIIRMTHESIYSQNASYAPSITSMSEDGIDDVGSCAESWATALVSELSQFGNQKNTEKSSKSEVTNKLELMDDFLEVEKLARLSNDSNTDTPASVSPSKKTSEIATNDVSEVNNSKDDSSEKQIVSNPLLNEVCSDAILSAPDPGSDVDVSSLTELRSRILVVFESMSKDANAEHVQMNSNLETAISQIHDFVLFLGREAMAVHDMSSNGDGMSQKIEEFSITFNKVLRNETSLLQFVLDLSCVLARVSEFKFNVLGYKGTEAENNSPDCIDKIALPENKLAQDNSPGERYQNGCSHILNPCSDLEVPDDGNVVSGYEPNATSKKFSVEEFEELKLEKEKAAMDLSRCNENLEMTKSQLQETEQLLAEVKSQLASAQNSNSLAETQLKCMAESYRSLETRAHELETELNLLRAKTETLENELRDEKRDHEDALAKCKELEEQLQRFDAHPISYWLLNVCSISNERDLAAAAEKLAECQETIYVLGKQLKALHPQTEQIGYPYSERSPKGEGFMEDEPTTSSPNLQELDQGEMDNATSPYLQKLGIGSPLHSSNNECSPSDNESNLPDRSPVRPPKHRPTKSNSSSASSTPTPEKHARGFSRFFSSKGKNGH 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0149 1016 Coils Coil 43 84 - -
Sto5g0149 1016 Coils Coil 127 187 - -
Sto5g0149 1016 Coils Coil 736 854 - -
Sto5g0149 1016 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 580 - -
Sto5g0149 1016 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 578 1016 - -
Sto5g0149 1016 Coils Coil 202 278 - -
Sto5g0149 1016 SUPERFAMILY Tropomyosin 735 897 - -
Sto5g0149 1016 MobiDBLite consensus disorder prediction 981 999 - -
Sto5g0149 1016 Coils Coil 338 358 - -
Sto5g0149 1016 MobiDBLite consensus disorder prediction 902 1016 - -
Sto5g0149 1016 MobiDBLite consensus disorder prediction 488 528 - -
Sto5g0149 1016 MobiDBLite consensus disorder prediction 921 941 - -
Sto5g0149 1016 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 580 - -
Sto5g0149 1016 PANTHER FILAMENT-PLANT-LIKE PROTEIN 578 1016 - -
Sto5g0149 1016 Pfam Filament-like plant protein, long coiled-coil 577 902 IPR008587 -
Sto5g0149 1016 Pfam Filament-like plant protein, long coiled-coil 81 581 IPR008587 -
Sto5g0149 1016 Coils Coil 380 400 - -
Sto5g0149 1016 MobiDBLite consensus disorder prediction 951 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0149 Sto-Chr5 858271 862579 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0149 5 858271 862579 Sto9g3691 9 35266941 35271154 CCT
Sto5g0149 5 858271 862579 Sto5g0149 5 858271 862579 ECH