Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2005 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGCAAAGGAGTCACTGCTAGCAGTATTGGTGTACTCCTCAAGGCATGTGATCCCTACCTAAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAGGTCTTTGTCTTAGATGATGGTGGTGagTCTGTTCTGGAAAAGGAGAGAAGGGGTGATTATCTGGGAAAAACTGTCCAGGTTGTTCCACACATAACAGATGCCATCCAAGAGTGGATAGAGCGTGTAGCAAAGATACCAGTTGATGGAAAAGAAGGGCCAGCTGATGTCTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCTATGCCTTTTATTGAGGCACTTGGCCAATTTTCATACCGTGTAGGCTCAGGCAATTTTTGTTTGGTTCATGTCAGCTTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCATAGTGTTCGTCAACTAAGGGGATTAGGATTAACCCCTAATATTCTTGCTTGTCGTAGTTCAAAGGAACTTGATGACAACGTCAAGTTGAAACTTTCTCAATTCTGCCATGTGCCTTTATCAAATATAGTTACACTCCATGATGTCCCAAACATTTGGCACATTCCTATACTAATGAGAGATCAGAAGGCGCATGAAGCAATCTTGAAAGCATTAAACCTACTAGGTGTTGCGACAGAGCCAAATCTCGAGGAATGGACCAATAAGACTAAAGTCTACGAAAAATTTATTGAACCTGTTAAAATTGCAATGGTAGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTGCACGCTTCTGTTGCTTATAATCGTAAACTTATTGTGGAATGGGTTCCAGCTGAAGATCTTGAAGAAGTTACTGCTAAAGAGGCTCCTGATGCACATAAAGCTGCTTGGGATCTTTTGAAGGGTGCAAATGCGATTTTAGTTCCGGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTCGCTGCTAAGTATGCTCGAGAAAATAATGTTCCATATCTTGGCATTTGCTTGGGGATGCAAATTGCAGTCATCGAGTATGCACGATCTGTTTTAGGGCTGCATGATGCGACCAGTACAGAGTTTGATCCTGAAACCAAGAACCCTTGTGTTATATTTATGCCAGAGGGTTCAAAGACTCATATGGGAGCAACTATGCGTCTTGGTTCAAGGAGGACTTACTTCGAAGTCACTGACTGCAAATCTGCAAAATTATATGGTAATGTAAGCTATGTTGATGAGCGGCATCGTCATAGATACGAGGTTAATCCAGACATGATATCACAGCTAGAGAATGCTGGGCTATCTTTTGTTGGCAAAGATGAAACTGGGAGTCGCATGGAGATAGTTGAACTGCCTGGCCATCCTTTCTTTATTGGTGTTCAGTTTCACCCTGAGTTCAAGTCTAGACCCGGGAAACCTTCTCCGCCATTTTTAGGATTAATAGCAGCAGCATGTGAACTGAGGAGGACAGTTCTGCCATCAAATGGCCATGCCAGTAAATTACCTAATGGGATATGTAACGGACACTCATCGACGACGACGAAAGCGAACCACAATGGAAACACATTCAAATCTTCAAACGGTGCCTTAAATGGCGTGTATACCAACGGAAACGGCGTATACGTCAATGGGACCTGGTAG 1713 0.4326 MKYVLVTGGVVSGLGKGVTASSIGVLLKACDPYLNTDAGTMSPFEHGEVFVLDDGGESVLEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGSGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNILACRSSKELDDNVKLKLSQFCHVPLSNIVTLHDVPNIWHIPILMRDQKAHEAILKALNLLGVATEPNLEEWTNKTKVYEKFIEPVKIAMVGKYTGLSDAYLSVLKALLHASVAYNRKLIVEWVPAEDLEEVTAKEAPDAHKAAWDLLKGANAILVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIEYARSVLGLHDATSTEFDPETKNPCVIFMPEGSKTHMGATMRLGSRRTYFEVTDCKSAKLYGNVSYVDERHRHRYEVNPDMISQLENAGLSFVGKDETGSRMEIVELPGHPFFIGVQFHPEFKSRPGKPSPPFLGLIAAACELRRTVLPSNGHASKLPNGICNGHSSTTTKANHNGNTFKSSNGALNGVYTNGNGVYVNGTW 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2005 570 Gene3D - 256 521 IPR029062 -
Sto4g2005 570 PANTHER CTP SYNTHASE 1 58 IPR004468 GO:0003883|GO:0006221
Sto4g2005 570 PANTHER CTP SYNTHASE 58 529 IPR004468 GO:0003883|GO:0006221
Sto4g2005 570 SUPERFAMILY Class I glutamine amidotransferase-like 259 512 IPR029062 -
Sto4g2005 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 234 IPR027417 -
Sto4g2005 570 CDD CTPS_N 2 230 IPR017456 GO:0003883|GO:0006221
Sto4g2005 570 TIGRFAM PyrG: CTP synthase 58 507 IPR004468 GO:0003883|GO:0006221
Sto4g2005 570 Pfam Glutamine amidotransferase class-I 271 506 IPR017926 -
Sto4g2005 570 CDD GATase1_CTP_Synthase 260 505 IPR033828 GO:0003883|GO:0006241
Sto4g2005 570 Gene3D - 59 254 IPR027417 -
Sto4g2005 570 Gene3D - 1 58 IPR027417 -
Sto4g2005 570 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 261 514 - -
Sto4g2005 570 PANTHER CTP SYNTHASE 1 58 - -
Sto4g2005 570 PANTHER CTP SYNTHASE 58 529 - -
Sto4g2005 570 Pfam CTP synthase N-terminus 58 234 IPR017456 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2005 Sto-Chr4 21165187 21171058 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2005 4 21165187 21171058 Sto4g2005 4 21165187 21171058 ECH