Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2004 ATGATTTTGCAGACTCAACAAGCACACCCTCTTTCTTTCGCCTCCGCTTGTAAACCCAACTTCTTTCCATTCTACCACCACCATCATCTCCATTTCAATGTTCGCTTTCGTGCTTTCTCCCCATTTTCCGAAGTGCCCATTTTCCCAACTTGTACTAGCAAGGCCCGCAGGAGGAGGAATTCGAACAACCCCATCagatgttcttcttcttctgcttcagCAACGTCGATTCCATTGCCGCCAGACCCAGATAAGCAACAGCAGCAAAATGAGAGTCAGGATTTACAAACACTTCTGAAAAGGTTTTGGAAAGTGGCTGCTCCTTATTGGGCTTCAGATGACAAAGTTCAAGCTAGAATACAACTTGCTGGTGTTTTTGCCCTCACTTTGGCTACCACTGGAATCAGCGTTGGCTTCAATTTCCTTGGGCGAGACTTTTATAATGCACTTGCGAACAAGGACCAGGAGCAATTCACGAAGCAGCTACTGTACTACTTGGCTGGATTTGCTGGAGGAATCCCGTTTTTTGTACTGAGAGACTATGCAAGAGATACTCTTTCTTTGAGATGGAGATCTTGGATGACAAGCTATTACATGGAGCGCTATCTTAAAAATCAGACTTTCTATAGAATTCAATCACAATCAATCATTGACAACCCAGACCAGCGAATTGTTGATGATCTTAGTTCTTTTACTGGGACAGCCCTCTCATTCTCTCTGATACTCTTTAATTCTGCGGTAGACTTAATCTCGTTCAGTAACATCTTGTATGGAATATATCCTCCTCTCTTCATTGTTCTTCTTGCATACTCCCTTGGTGGGACCGCTATCAGTGTTTTTCTTGGAAGGGGATTGGTGAACTTGAATTTCTTGCAAGAGAAAAAAGAAGCAGATTTTCGTTATGGGCTAGTGCGCATTCGGGAAAACGCTGAATCAATTGCTTTCTATAGTGGTGAAAAAAGTGAAATGCAACTTCTTCTGCAGCGCTTCAGAAGTGCTTTTGAAAACCTAACTCAATTGTTGATATCTTCTAGAAATCTGGAGTTCTTCACCAATGGATACCGCTATCTCATTCAAATTCTTCCTGTGGCTGTTGTTGCTCCCATGTATTTCTCAGGAAAAATTGAATTTGGTGTCATTAATCAGTCGGTCTCTGCTTTCAATCATATCCTTGGTGACTTTTCCCTTATTGTGTACCAGTTTCAAGCAATAAGTGCATTTTCTGCTGTCATAAATCGGCTAGGTGAATTTGATGATATTCTGGACACTGGAAGTGGCTCTAAATCTCTCTCTTATACATCGGAAGAGATATGTATTACCTACAAAAATGTTGAGAGTTCATTTGTATTGGAATCCAATGGATCGACACCACCGGAAAAATGTGAAACATTATTGGAGATAGAAAATTTGACTCTGAAGACTCCAAGTGAAGCTACACTTATTAGAAACTTGTCATTGAGGATCAAGGAAAAGGAGCATTTATTGATAATGGGACCAAGTGGAAGTGGCAAGACTTCGTTTTTAAGAGCTCTGGCTGGTCTATGGAATACTGGTACTGGAAAAATCACTTACTACATGAAAGACAAGGAAAATATTCCTACAGTTAACAAGGCTCAAGATCCACAAGAAGAAGTACATGGAAAATCCTTGAACAAAATTTCCAGAACTTTTTTCCTTCCTCAAAGGCCATACATGGTCTTGGGTTCTCTTCGTCAACAATTACTTTATCCAATATGGGCTGACAATGCAGTTCTTGTATCAGAAAACACAGAAGATAAGACTACACTGCCTTTCCTGATGAAACCACCAAACTTAGGCACCATGAACGAAAAGCCTGAAATGCCAACAACAGATGAGCTGATAAAGGTCTTAGAGGACGTCCGGCTCAGCTATATATTGGCTCGGTTTAGCTTGGATTCAACATGTGAATGGTCTAGTGTTCTTTCTCTAGGAGAGCAGCAACGCCTCGCATTTGCCCGTCTTTTGCTTTCTACACCACAATTGGTTTTGTTGGATGAATCTACAAGTGCTCTTGATGAAGCCAATGAGGCTCATTTGTATCAGAAGATTGAAGCAGCCGGCATAACTTATATCAGTATCGGCCATCGGCGAACCTTGCGTGACTATCACAAGAAGATTTTACGGATATCCCCAGTTGATTCTAACAATAACCAGCTAAATTGGCTTGTTGAGTCCACTAGAGACCAGTCTTCTGATATTCCAAAGCTAAGATTATAG 2238 0.4075 MILQTQQAHPLSFASACKPNFFPFYHHHHLHFNVRFRAFSPFSEVPIFPTCTSKARRRRNSNNPIRCSSSSASATSIPLPPDPDKQQQQNESQDLQTLLKRFWKVAAPYWASDDKVQARIQLAGVFALTLATTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLAGFAGGIPFFVLRDYARDTLSLRWRSWMTSYYMERYLKNQTFYRIQSQSIIDNPDQRIVDDLSSFTGTALSFSLILFNSAVDLISFSNILYGIYPPLFIVLLAYSLGGTAISVFLGRGLVNLNFLQEKKEADFRYGLVRIRENAESIAFYSGEKSEMQLLLQRFRSAFENLTQLLISSRNLEFFTNGYRYLIQILPVAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGEFDDILDTGSGSKSLSYTSEEICITYKNVESSFVLESNGSTPPEKCETLLEIENLTLKTPSEATLIRNLSLRIKEKEHLLIMGPSGSGKTSFLRALAGLWNTGTGKITYYMKDKENIPTVNKAQDPQEEVHGKSLNKISRTFFLPQRPYMVLGSLRQQLLYPIWADNAVLVSENTEDKTTLPFLMKPPNLGTMNEKPEMPTTDELIKVLEDVRLSYILARFSLDSTCEWSSVLSLGEQQRLAFARLLLSTPQLVLLDESTSALDEANEAHLYQKIEAAGITYISIGHRRTLRDYHKKILRISPVDSNNNQLNWLVESTRDQSSDIPKLRL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2004 745 Pfam ABC transporter transmembrane region 2 114 371 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto4g2004 745 Gene3D ABC transporter type 1, transmembrane domain 82 420 IPR036640 GO:0005524|GO:0016021
Sto4g2004 745 MobiDBLite consensus disorder prediction 57 91 - -
Sto4g2004 745 Gene3D - 458 725 IPR027417 -
Sto4g2004 745 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 123 406 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto4g2004 745 SUPERFAMILY ABC transporter transmembrane region 100 417 IPR036640 GO:0005524|GO:0016021
Sto4g2004 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 465 743 IPR003439 GO:0005524
Sto4g2004 745 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 78 731 - -
Sto4g2004 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 716 IPR027417 -
Sto4g2004 745 CDD ABCD_peroxisomal_ALDP 465 718 - -
Sto4g2004 745 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 78 731 - -
Sto4g2004 745 SMART AAA_5 490 717 IPR003593 -
Sto4g2004 745 Pfam ABC transporter 482 676 IPR003439 GO:0005524
Sto4g2004 745 ProSitePatterns ABC transporters family signature. 648 662 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2004 Sto-Chr4 21154920 21162633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2004 83 738 Acyl Lipid Metabolism Gene Families AT1G54350 68.389 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2004 - - gmx:102661014 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2004 4 21154920 21162633 Sto4g2004 4 21154920 21162633 ECH