Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1863 ATGCTTTCGTTGTTGCCAGGTGAAGAAAGTACATATCTCAGTTCAGACAGCATTTGCAACCAAGAATCAAATTCTGAATTAGCAGGTATTGCAAAAGTTGTATTGAAAAAGGGGAAGTCACAACTCTTTAAGGATGGGAACCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGACCACCTCCTAAGACTGGAGATATTGTACTTGTGGCAGATGGGACTGAAAAACCGATAGGGTGGGGATTGTACAACTCAGTTTCTATGTTCTGCGTCCGGCTCATGCAGTTTGAAGATGAAGCTgctagGGATTCATTGTCTGCTCTGAACATCGAGAAATTGCTTGAAACAAGAATAGGTGCAGCAGTTGAATTGCGTAGAAGGTTGGGTCTTCCTTCAGCACATACCAATGCATATCGTCTAATTAATAGTGAGGGAGATAGATTATCGGGATTGATCGTTGACATCTTTGGAGATGTAGCTGTCATAGCATCATCTGCTGCTTGGGTTGAGAAGTACAAAGCACAGATAGAGGCATGCATCAGTAGAATCAATGACATCAATCACATAAATTGGAGACCATCTGTTGACATCTTAAAGGAAGAAGGGGTGGATGCATCAGATTTGAAGGAAATTCATTCATCTACTTGTCCTGAAAGGTCAAAGATTATGGAAAATGGAATTTTGTATGCAATTTCACTGAAGGGCCAGAAGACAGGATTTTATGCAGATCAACGCGAGAACCGCCATTTTATATCAAGAATTTCAGATGGTCAAAAGGTTCTTGATCTTTGCTGCTATAGCGGTGGTTTTGCTCTGAATGCAGTACGTGGAGGCGCTGTAAATGTCACTGGTGTTGATACATCACTGCCTGCTTTGGAGCTTGCTAAAGAAAATGTTGCACTTAACAACATGGATCCTGAAAGAATATCATTTTTGAGAGAAGATGCCACTGTATTTATGAAGAGTGCTCTGTCAAGAAATGAGTCATGGGATATTGTTATCATTGATCCTCCTAAACTGGCACCAACGAAAAAGGTTCTACATAGTGCATCAGGCATGTACAGAAATTTGAACTCATTGGCTATACAACTAACAAAAAGAGGCGGTCTTCTTATGACGTGTTCTTGTTCCGGAGCTGTGACACAAAGTGGAATACTCTTGCGTATTCTTCAGGGTGCAGCATCTATGGCAGGCAGGAAAATCACAGTTCTAAGACAAGCTGGAGCAGCTTGTGATCATCCTATAGACCCGTCTTATCCAGAAGGGGCATACCTATCCAACATTCTACTAAGAGTTCTATGA 1308 0.4121 MLSLLPGEESTYLSSDSICNQESNSELAGIAKVVLKKGKSQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRLMQFEDEAARDSLSALNIEKLLETRIGAAVELRRRLGLPSAHTNAYRLINSEGDRLSGLIVDIFGDVAVIASSAAWVEKYKAQIEACISRINDINHINWRPSVDILKEEGVDASDLKEIHSSTCPERSKIMENGILYAISLKGQKTGFYADQRENRHFISRISDGQKVLDLCCYSGGFALNAVRGGAVNVTGVDTSLPALELAKENVALNNMDPERISFLREDATVFMKSALSRNESWDIVIIDPPKLAPTKKVLHSASGMYRNLNSLAIQLTKRGGLLMTCSCSGAVTQSGILLRILQGAASMAGRKITVLRQAGAACDHPIDPSYPEGAYLSNILLRVL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1863 435 CDD AdoMet_MTases 261 376 - -
Sto4g1863 435 CDD RlmI_M_like 115 204 - -
Sto4g1863 435 SUPERFAMILY PUA domain-like 32 100 IPR015947 -
Sto4g1863 435 Gene3D PUA domain 30 101 IPR036974 GO:0003723
Sto4g1863 435 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 430 IPR029063 -
Sto4g1863 435 Pfam S-adenosylmethionine-dependent methyltransferase 212 397 IPR019614 GO:0008168
Sto4g1863 435 Gene3D Vaccinia Virus protein VP39 222 435 IPR029063 -
Sto4g1863 435 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 22 435 - -
Sto4g1863 435 SMART pua_5 31 125 IPR002478 GO:0003723
Sto4g1863 435 Pfam PUA-like domain 33 97 IPR041532 -
Sto4g1863 435 Gene3D RNA methyltransferase domain (HRMD) like 112 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1863 Sto-Chr4 19343068 19350881 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1863 - - gmx:100796633 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g1863 4 19343068 19350881 Sto4g1863 4 19343068 19350881 ECH