Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0096 ATGGCTTCTTATCTGCAGAAACAGAGTACTCTGTTTCTCGTTGTTCTTCTTGTGATGGTGGATTGTGGGTGTGGTCGTTTCGTGGTGGAGAAGAGTAGTGTTAGTGTGTTGTCTCCTCATAAATTGAGGTCGAAGCATGATGGTGCAATTGGGAACTTTGGGATTCCTGATTATGGCGGTTTTATAGTTGGCTCTGTGATTTACCCTCAGAAGAGCTCCTCCAATGGATGCCAACCCTTTGAAGGGGATAAGCCCTTCAAGTCTCTCTCTTTTCGTCCCACTATTCTTCTTCTTGATCGAGGAGAGTGCTACTTCGCATTGAAAGTATGGCATGCTCAACAAGCCGGAGCCGCCGCAGTTCTGGTCACAGACAGCGTCGACGAGCCTCTCATCACCATGGATTCGCCGGAGGAGACCTCCGACGCCGACGGCTACATCGAGAAAATCGGCATTCCCTCCGCTCTCATCGACAAACCCTTCGGCGATTCCCTAAAAGAAGCCTTGCGGAACAACAAGCAGCAGGAGGACGTTCTGGTCCGAATCGATTGGAGGGAATCGGTGCCTCACCCCGATAACCGAGTCGAGTACGAGTTCTGGACCAATAGCAACGACGAATGCGGGGCCCGATGCGACGAACAGATGAATTTCGTGAGGAATTTCAAGGGTCACGCCCAGATTCTTGAGAGGGGTGGCTACACTTTGTTCACTCCGCACTATATTACTTGGTATTGTCCCTTGGCTTTCGTTTCTAGCAGTCAATGTAAGTCGCAGTGTATAAACCGTGGGAGGTATTGTGCCCCAGATCCTGAGAAGGATTTTGGAGAGGGGTATCAAGGGAAGGATGTGGTGTATGAGAATTTGAGGCAACTCTGTGTCCATAGGGTTGCCAATGAGAGCAATCGGTCATGGGTGTGGTGGGATTATGTCACGGATTTCCATATCAGATGCTCTATGAAGGAGAAGAGATATAGCAAAGAGTGTGCTGAGGATGTCATGAAATCATTAGAATTTCATGGCCGCTATTTTGCCCCCAAAACACTTTCTTGTTCTGTCATGCATGGGAATTCTGTTTTCTGTTTTATCAAGTTTAATTCTATTACTACAGATCTGCCAATTGAGAAAATTAAGAAATGTATGGGTGATCCTGAAGCTGACGTGGATAATGAAGTACTAAAGACAGAGCAGGAGCTCCAGATTGGGCGAGGATCTCGTGGTGATATCACCATCCTGCCAACATTGGTTATAAACAATGTACAATATCGAGGAAAATTGGAGAGAGTTGCTGTCCTGAAGGCTATATGTGCAGGATTTAAGGAGACTACTGAACCTGCAGTTTGTTTAACTGGAGATCTTGAAACTAATGAATGTCTTGAAAGGAATGGAGGATGTTGGCAGGACAAAGTTGCTAATGTAACTGCTTGCAAGGATACATTTAGGGGAAGAGTTTGTGAGTGCCCCATTGTAAAAGGTGTTCATTTCAGAGGTGATGGTTATACATCTTGTGAAGGTTTTGGACCTCTAAGGTGTTCAATAAACAATGGAGGTTGCTGGTCAGAGACTAGAAATGGAAAAACTTACTCAGCTTGCTCAGAGTATAAAGTAGAGGGCTGTGAGTGTCCAGTTGGCTTTCGAGGGAATGGTAAAAAATGTGAAGATATTGATGAATGCAAAGAACGAAGTGTTTGTCAGTGTGATGGCTGCAACTGCAAGAACACATGGGGTGGTTATGATTGCAAGTGCAAGGGAAATCTTCTGTATATAGAGGAACGGGATGTTTGTATTGAAAGAAGTGGATCAAGATTTGTTGGGTTCCTTGCCTTCATGATTTTGGCAGTTGTTTCGGGTGCTGGCATAGCTGGTTATATATTCTACAAGTACAGGCTCAGGTCTTACATGGACTCAGAGATCATGGCTATTATGTCCCAATACATGCCACTAGATCACCAGAATAATGAAGATCAAAGTGAAGTTCAACCATTACGACAAACCTCTGTATAA 1998 0.4499 MASYLQKQSTLFLVVLLVMVDCGCGRFVVEKSSVSVLSPHKLRSKHDGAIGNFGIPDYGGFIVGSVIYPQKSSSNGCQPFEGDKPFKSLSFRPTILLLDRGECYFALKVWHAQQAGAAAVLVTDSVDEPLITMDSPEETSDADGYIEKIGIPSALIDKPFGDSLKEALRNNKQQEDVLVRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVRNFKGHAQILERGGYTLFTPHYITWYCPLAFVSSSQCKSQCINRGRYCAPDPEKDFGEGYQGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHIRCSMKEKRYSKECAEDVMKSLEFHGRYFAPKTLSCSVMHGNSVFCFIKFNSITTDLPIEKIKKCMGDPEADVDNEVLKTEQELQIGRGSRGDITILPTLVINNVQYRGKLERVAVLKAICAGFKETTEPAVCLTGDLETNECLERNGGCWQDKVANVTACKDTFRGRVCECPIVKGVHFRGDGYTSCEGFGPLRCSINNGGCWSETRNGKTYSACSEYKVEGCECPVGFRGNGKKCEDIDECKERSVCQCDGCNCKNTWGGYDCKCKGNLLYIEERDVCIERSGSRFVGFLAFMILAVVSGAGIAGYIFYKYRLRSYMDSEIMAIMSQYMPLDHQNNEDQSEVQPLRQTSV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0096 665 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 14 344 - -
Sto13g0096 665 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 367 642 - -
Sto13g0096 665 SUPERFAMILY PA domain 88 129 IPR046450 -
Sto13g0096 665 Gene3D - 24 190 - -
Sto13g0096 665 Pfam PA domain 64 164 IPR003137 -
Sto13g0096 665 ProSitePatterns Calcium-binding EGF-like domain signature. 552 578 IPR018097 GO:0005509
Sto13g0096 665 Gene3D Laminin 507 595 - -
Sto13g0096 665 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 367 642 - -
Sto13g0096 665 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 344 - -
Sto13g0096 665 SMART egfca_6 552 594 IPR001881 GO:0005509
Sto13g0096 665 Gene3D Laminin 446 496 - -
Sto13g0096 665 CDD EGF_CA 552 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0096 Sto-Chr13 799023 806046 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0096 13 799023 806046 Sto13g0096 13 799023 806046 ECH