Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1503 ATGGCTAAGAGGGCAGTGTTAATAGGATGCAACTACCCAGGAACAAAGGCTGAATTGAAAGGGTGCATTAAGGATGTGTGGAGGATGCACAAGTGCCTCATCAACGTATATGGATTCTCAGAAAAAGACGTCATTGTCCTCATTGACACTGATCATTCCTACACCCAACCCACTGGCAAGAACATAAGAATGGCATTGTCCAAGCTGGTCCGATCAGCCAAGCCCGGCGACGTCCTCTTTCTCCACTACAGCGGCCACGGCACGCGCCTCCCAGCCGAGACGGATGAGGAGGACAATACGGGCTATGATGAATGCATTGTTCCTACTGATATGAATCTCATCATTGATGATGACTTCAGGCAATTTGTAGACAAGGTACCAAGAGGTTGTAGGATCACAATCGTTTCAGATTGTTGCCACAGCGGTGGTCTAATTGAAGCAAAGGAGCAAATAGGAGACAGCACAGACGAAGGAACCCAAAACTCGGCCTCTCTATTTCACTTCAAAAACGTCCTCCATCGAAACATGGAACAAGACACCATTGTGATGAGGAACCGGTCATTGCCTCTGTCAACTCTCACCGACATACTCAAGCAGAAGAGTGGGAAAGATGACATAGAAATCGGGAAACTAAGGCACACGCTTTTTCACGTCTTCGGGGAAGACGCAAGCCCCAGAGTGAAGAATTTCACGAAACACAAACTCCAACATGGGAGTGGTGAGAGTGGGGGACACAGAATTCTGGGGCTGGTGGGTGATCTTGCGCAACAAATTTTCGAACATAAGCCAGACGAGGATGACGAGGGACACGTGGAAAAACGTGGTGGGAGCAAGAAAGAGGAACATGCTGCATCCGTTAAGCGCAGCCTTTTGGACTGTGGGATTCTGTTGAGTGGTTGCCAGAGTGACCAAACTTGTGCGGATGCAAGTCCTAATGGAAATTCTGACACGGCTTATGGGGCGTTCAGCAATGTTATACAGGATATAATTGAAGAGACAAATGGGGCAGTGACAAATCGTGAGCTTGTTCTGAAGGCTAGGACGATGCTTAAGAGGCAGGGTTTCTCTCAGAAGCCTGGACTGTATTGCGGTGTTAATAATGTTCACGCTCCTTTTGTGTGCTGA 1125 0.4809 MAKRAVLIGCNYPGTKAELKGCIKDVWRMHKCLINVYGFSEKDVIVLIDTDHSYTQPTGKNIRMALSKLVRSAKPGDVLFLHYSGHGTRLPAETDEEDNTGYDECIVPTDMNLIIDDDFRQFVDKVPRGCRITIVSDCCHSGGLIEAKEQIGDSTDEGTQNSASLFHFKNVLHRNMEQDTIVMRNRSLPLSTLTDILKQKSGKDDIEIGKLRHTLFHVFGEDASPRVKNFTKHKLQHGSGESGGHRILGLVGDLAQQIFEHKPDEDDEGHVEKRGGSKKEEHAASVKRSLLDCGILLSGCQSDQTCADASPNGNSDTAYGAFSNVIQDIIEETNGAVTNRELVLKARTMLKRQGFSQKPGLYCGVNNVHAPFVC 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1503 374 Pfam Caspase domain 3 363 - -
Ssu8g1503 374 Gene3D - 254 372 - -
Ssu8g1503 374 Gene3D - 1 203 - -
Ssu8g1503 374 PANTHER METACASPASE-4 1 160 - -
Ssu8g1503 374 PANTHER METACASPASE-4 176 374 - -
Ssu8g1503 374 MobiDBLite consensus disorder prediction 260 283 - -
Ssu8g1503 374 PANTHER METACASPASE-5 1 160 - -
Ssu8g1503 374 PANTHER METACASPASE-5 176 374 - -
Ssu8g1503 374 SUPERFAMILY Caspase-like 4 118 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1503 Ssu-Chr8 30808641 30813923 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1503 8 30808641 30813923 Ssu8g1503 8 30808641 30813923 ECH
Ssu8g1503 8 30808641 30813923 Ssu2g0459 2 26471226 26474310 PCT