Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0378 ATGGTGAACTTCATGTTGATGATCACCGCGGACCTTGAGAACCTCACCAATCTCGAACCCCAAGGTGGCTGCGACGACGCCAACTTCTCCTACCTCTTCAAGTTGAAATGCGGGAGATGCGGAGAACTAACCCAAAAAGAAACTTGCGTCGCCTTAAATGACACCGTTCCTCTCCCTGTTGGCAAGGGCACTACTCATCTCATTCAAAAGTGCAAATTTTGTGGCAGGGATGGCACTGTGACAATGGTCCAAGGCAGAGGTAAACCACTCACCCAGGAAATCAGTGAATCAGGGAAGTACGCCCCATTAATGTTATTTGACTGCAGGGGCTATGAGCCAGTAGATTTTGTATTCGGTAATGGATGGAAAGTTGAGTCGCTGGAGGGAACCAAGTTTGATAATGTTGACTTGTCAAGTGGAGAATTTGCCGAATATGATGAGAAGGGAGAGTGCCCAGTCATGATATCCAATCTTCGAGCTACTTTTGAAGTGATGAAGTAG 501 0.4691 MVNFMLMITADLENLTNLEPQGGCDDANFSYLFKLKCGRCGELTQKETCVALNDTVPLPVGKGTTHLIQKCKFCGRDGTVTMVQGRGKPLTQEISESGKYAPLMLFDCRGYEPVDFVFGNGWKVESLEGTKFDNVDLSSGEFAEYDEKGECPVMISNLRATFEVMK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0378 166 PANTHER UNCHARACTERIZED 1 166 IPR008584 -
Ssu5g0378 166 Pfam CXXC motif containing zinc binding protein, eukaryotic 5 162 IPR008584 -
Ssu5g0378 166 SUPERFAMILY MAL13P1.257-like 1 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0378 - - gmx:100500192 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0378 5 8073243 8075653 Ssu5g0378 5 8073243 8075653 ECH