Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0366 ATGGATATTGCTGCTCTTTTAACTTCTGCTGGAATCAATATTGCTGTGTGTGTGGTgctcttttcattttattctgtATTAAGAAAACAACCCAGCAATGTTAACGTGTACTTTGGAAGGAGACTAGCCTCTCAGCATTCAAGACGCATTGATCTCTGCTTGGAAAGATTTGTTCCATCCCCTAGCTGGATATTGAAAGCATGGGAAACGTCCGAGGATGAGATACTGGCTATTGGTGGCTTGGATGCTGTGGTTTTTGTGAGGATTCTTGTGTTCAGTATTCGAGTGTTTTCCATTGCTGCTGTCATCTGCACTGTTCTAGTGCTTCCTGTAAATTACCATGGTAAGGACAGAATGCGTAAGAATATACCTTTTGAGTCACTGGAAGTATTTACCATCGAGAATGTCAAAGAAGGTTCAAAGTGGCTTTGGGCTCATTGTCTTGCACTATACGTCATAACATTCTCGGCTTGTGCTCTTCTTTACTTTGAATATAAGAGCATTACTAATTTGAGGCTACTACATATTATTGGATCACCTCCAAATCCAAGTCATTTTACAATTCTTGTCCGATCAATTCCCTCGTCTTCAGAAGAGTCGTACTGTGAAACTGTGAAAAAATTCTTCTCATATTACCATGCATCAACATATTTGTCGCACCAAATGGTTTATAAGTCTGGTACAGTTCAAAAACTGAAGGATGATGCTGAACATATGTGTAAGGTACTTAGAGATGCTTCATTGGAAAAGACTTGTAAGCCTGGTTTTATGCAATGTTGCAGTTCTGGGGCAGCaacaaattcttttaagaaGATTTCTAATGAAATGGATAGTAAGCACGGGAGAACAGGCTACACTGACATGAATTTAGATACaagaaaaaagGAATGTGCTGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCACAGATACTGCAGACATCAAATCCTATGTTATGGGTGACAGACGTAGCTCCTGAACCACATGATGTTTATTGGTCCAATATTTGCATACCATATAGGCAACTTTGGATCCGTAAGATAGCTACACTTGTGGCCTCTGTTGCCTTCATGCTTGTGTTCCTTATCCCAGTTACATTTGTACAAGGCTTGACTCAACTAGACAAACTTCAGAAAATGTTCCCTTTTTTGACAGGGATGCTTAAAAAGAACATTGTGAATCAGGTGGTGACTGGTTACCTACCAAGTGTgatattggttttatttttatgcgCAGTTCCACCTGTAATGATACTATTTTCTTCTGTGGAGGGTTCTATTTCCCGTAGTGCAAGGAAGAAGAGTGCATGTTGTAAAGTCTTGTACTTCACAATCTGGAACGTGTTTtttgttaatgtatttactGGTTCTGTTATCAGTCAACTCTCTGTCTTTTCTAGCGTGACAGATCTGCCTGCCCAACTTGCCAAGGCGGTGCCAGCGCAGGCTACTTTCTTCACAACTTACATTTTATCATCTGGTTGGGCAAGTTTGGCATGTGAAGTTATGCAAATTTTCCCTCTTCTATGCAATCTTTTCCAGAGATTCATACTCAGGCTTAAGGATGATGCACTGGATGGCAGCCTATCTTTTCCATACCATACAGAAGTTCCAAGAGTCTTACTGTTTGGATTCCTTGGGTTCACTTGTTCTATTCTGGCACCCCTAATGTTGCCCTTCTTGTTGATCTACTTTTTCCTTGCTTACCTGGTTTACCGAAACCAGattatcAACGTGTACATTACAAAATACGATAGTGGGGGACTGTACTGGCCCATTGCTCACAACACAACGGTCTTCGCATTGCTGTTTGCTCAACTTATAGCGCTAGGGGTGTTTGGACTTAAACGCTCATCAGTTGCATCTGGATTCACCATTCCACTGCTGATTGGTACGCTCCTATTTCACCAGTATTGTAGGCAAAGGTTTCTCCCAGTATTTAAGAGCAATTCAGCACAGATTCTTATTGACATGGATCAGAGAGATGAGCACGGTGAAAGGATGGAAGAGATTTATGAACATTTGCGTTCAGCCTACAACCAGATCAGTTTAATGCCGCATGCCTCAAGCCAACCCGAATGCTTCAGTCATCACGAGGACAAGGAGAGTGGTCAATCTTCAGAAGATATGGAGAAAGGCAAGGAAGTTAATCAAAAAGATAGACCACGGCCCGTTCAACGCTCATTGAGTTCGAGTTCGGATAAAGCGGTACTTGGTGTAAAGTAA 2241 0.4025 MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRIDLCLERFVPSPSWILKAWETSEDEILAIGGLDAVVFVRILVFSIRVFSIAAVICTVLVLPVNYHGKDRMRKNIPFESLEVFTIENVKEGSKWLWAHCLALYVITFSACALLYFEYKSITNLRLLHIIGSPPNPSHFTILVRSIPSSSEESYCETVKKFFSYYHASTYLSHQMVYKSGTVQKLKDDAEHMCKVLRDASLEKTCKPGFMQCCSSGAATNSFKKISNEMDSKHGRTGYTDMNLDTRKKECAAAFVFFKSRYAALMAAQILQTSNPMLWVTDVAPEPHDVYWSNICIPYRQLWIRKIATLVASVAFMLVFLIPVTFVQGLTQLDKLQKMFPFLTGMLKKNIVNQVVTGYLPSVILVLFLCAVPPVMILFSSVEGSISRSARKKSACCKVLYFTIWNVFFVNVFTGSVISQLSVFSSVTDLPAQLAKAVPAQATFFTTYILSSGWASLACEVMQIFPLLCNLFQRFILRLKDDALDGSLSFPYHTEVPRVLLFGFLGFTCSILAPLMLPFLLIYFFLAYLVYRNQIINVYITKYDSGGLYWPIAHNTTVFALLFAQLIALGVFGLKRSSVASGFTIPLLIGTLLFHQYCRQRFLPVFKSNSAQILIDMDQRDEHGERMEEIYEHLRSAYNQISLMPHASSQPECFSHHEDKESGQSSEDMEKGKEVNQKDRPRPVQRSLSSSSDKAVLGVK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0366 746 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 340 IPR027815 -
Ssu5g0366 746 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Ssu5g0366 746 Pfam Calcium-dependent channel, 7TM region, putative phosphate 351 618 IPR003864 GO:0016020
Ssu5g0366 746 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 732 IPR045122 GO:0005227
Ssu5g0366 746 MobiDBLite consensus disorder prediction 698 727 - -
Ssu5g0366 746 MobiDBLite consensus disorder prediction 695 746 - -
Ssu5g0366 746 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0366 Ssu-Chr5 7715375 7723812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0366 K21989 - gmx:100796574 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0366 5 7715375 7723812 Ssu5g0366 5 7715375 7723812 ECH
Ssu5g0366 5 7715375 7723812 Ssu1g3670 1 92492763 92504964 PCT