Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0364 ATGAACAAAGACGAAAGCGATCGGAACGAAAAGAAAGCGCAAGATATCAAGCTTTGGGGAGTTTTCCTCTTCGGAGTAATCGGCGCCACCGTCACCGCCTTCTCCCTGTCCAGGTTGCAGTCGAAAGGAGGTAGTGGCAGTTCTTTCCGATCAGCTTTTCAAGAAGAAGCATGGAAGAGGTACAATAAGCGACTGCAAGAGGAGTACGAGGAGGAGATGGAGAGGGTGGAACGAATAAGGCGTATGCAAAGTGTGTTTAATAGAGAAAGGGATAAGTATAGAAGAAACTATGAGAGCTGGAGGGGAAACGGTACTGATGCACATCATCAACATTTCCAAAGAGATGATTGGTATTGGAAGGCTGAAACATCCTTCAGAGAGCAGTGGGCCAATTATCAACACACTCGTAGAGAGGGCGGAAACTATTCGTTATCACATCACTACTCAGTTTTGGGTCTCGACAGGTTTAGAACAATGCCATATACAGATGCTGAGATTAagACAGCATTTAGGACCAAGGCAAAGCAATATCATCCTGACCAGAACCAGGATAATAGAGAGGCTGCAGAGGCCAAGTTCAAAGAAATAATTTGTTCATATGAGGCCGTACAACAGGAAAGAAAGAACCAGAATCTGTAA 639 0.446 MNKDESDRNEKKAQDIKLWGVFLFGVIGATVTAFSLSRLQSKGGSGSSFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQSVFNRERDKYRRNYESWRGNGTDAHHQHFQRDDWYWKAETSFREQWANYQHTRREGGNYSLSHHYSVLGLDRFRTMPYTDAEIKTAFRTKAKQYHPDQNQDNREAAEAKFKEIICSYEAVQQERKNQNL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0364 212 ProSiteProfiles dnaJ domain profile. 146 208 IPR001623 -
Ssu5g0364 212 Gene3D DnaJ domain 134 212 IPR036869 -
Ssu5g0364 212 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 212 - -
Ssu5g0364 212 Pfam DnaJ domain 147 210 IPR001623 -
Ssu5g0364 212 CDD DnaJ 147 196 IPR001623 -
Ssu5g0364 212 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 4 212 - -
Ssu5g0364 212 SMART dnaj_3 145 208 IPR001623 -
Ssu5g0364 212 PRINTS DnaJ domain signature 188 208 IPR001623 -
Ssu5g0364 212 PRINTS DnaJ domain signature 170 185 IPR001623 -
Ssu5g0364 212 Coils Coil 55 82 - -
Ssu5g0364 212 SUPERFAMILY Chaperone J-domain 145 210 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0364 Ssu-Chr5 7682950 7691360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0364 - - gmx:100804936 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0364 5 7682950 7691360 Ssu5g0364 5 7682950 7691360 ECH
Ssu5g0364 5 7682950 7691360 Ssu1g3673 1 92601993 92603843 PCT