Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0355 ATGATACTGGTTAGCCATACCCAAGCTCCTTCCGGAGGAGCCATGTTTTCAAATTCAAAGTGTTCTCTCTCGCCCCCACCCAAATTCATCACTGTAACAAACCCACTATCGTTCTGTAATCCTTTACCCAAATTCATCACTAGAAGAAGCTCCACAAGACCCTTGCATCTCGCACTTGCCAAAGCAGAGGGAAACCTCGACTCAGATTCAGCCTCAACTTCCTCTTCTCCCTCTCCTTTTGCCAACGACCAAACGGTTTTCGTGGCTGGCGAGGATGTTCCCTTGGAGGGTGTCATCCAGTTCGAGAAACCCACCTTTTCTCCTCCTCTTGAAAAATGGggGCGTGTGGCTCTGCTAGCTGGTGCGGATGTGTTGGCCTTGTTTTTGTTTGCAACGATTGGAAGATATAGTCATGGACTTTCTGTTTTGGACTTTGACACTCTGCGCACTGCTGATCCTTTTATAGCGGGGTGGTTTTTGGGTGCTTACTTCCTTGGAGGTTTTGGGGAGGATGGCCGTGGGATGAAGGGTCTCTCCAAAGGTGTCATTGCTACTGCCAAGTCATGGGCAGTTGGGATCCCTATAGGAATAGTAATAAGGGCAGCAACATCAGGTCATCTACCGAATTATGGTTTTGTATTTGTGAGTCTTGGAAGCACTGCTGTTTTACTTATCACATTCAGAGCATTATTATATACTATTCTTCCAGTTGACAATGGTAAGAAGAGCGATGTTTATCGCCGTGGCAGTCCCTTTGAACTCTTTGAGCTGCTCACATCATTAGTGCGGCGGTGGTAG 798 0.4699 MILVSHTQAPSGGAMFSNSKCSLSPPPKFITVTNPLSFCNPLPKFITRRSSTRPLHLALAKAEGNLDSDSASTSSSPSPFANDQTVFVAGEDVPLEGVIQFEKPTFSPPLEKWGRVALLAGADVLALFLFATIGRYSHGLSVLDFDTLRTADPFIAGWFLGAYFLGGFGEDGRGMKGLSKGVIATAKSWAVGIPIGIVIRAATSGHLPNYGFVFVSLGSTAVLLITFRALLYTILPVDNGKKSDVYRRGSPFELFELLTSLVRRW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0355 265 PANTHER T12C22.21 PROTEIN 7 265 - -
Ssu5g0355 265 Coils Coil 264 265 - -
Ssu5g0355 265 Pfam Protein of unknown function (DUF3054) 121 230 IPR021414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0355 Ssu-Chr5 7512183 7514881 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0355 - - gmx:100790514 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0355 5 7512183 7514881 Ssu5g0355 5 7512183 7514881 ECH