Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0352 ATGGAACACACCAATTACAACAACATCAGCAACTATAGTTGTAATGATGGTCATTGTGAAGGGACTATAGTAAACGTTCCTTTCTCGTGGGAACACAAGCCTGGTCTCTCTAAAGTCACCAATGGCCACAATGGCACTAGATTAGTGCTTCAGCCTCCTCCATGTTCATCCTTATCAGGATCTGGAAGTGATCATAGACACAAAGTGGAGGAGGATGCTCAGATTCTATGTGCAGTGCAGACCTCACTCAGAATCAGCTCTTTTCGGATGGAGAGTCAGAAGGAAGAAGACCCTTTTGTTGAAGCTTACAAGAAATGCACTCAAAGTCCCTTTATACATCAAGGGGGTCATAGGGTCCAAAAGAACAATAGATCTTGGCCTACCATAAGGAAGTATGTGAATATTCTTTCTTGCAAGCACTCCGATGATGTCTGTAGTCGCAAACCTATCAATACCTATAAAAGTTGA 468 0.4252 MEHTNYNNISNYSCNDGHCEGTIVNVPFSWEHKPGLSKVTNGHNGTRLVLQPPPCSSLSGSGSDHRHKVEEDAQILCAVQTSLRISSFRMESQKEEDPFVEAYKKCTQSPFIHQGGHRVQKNNRSWPTIRKYVNILSCKHSDDVCSRKPINTYKS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0352 155 PANTHER BNAA08G25910D PROTEIN 15 150 - -
Ssu5g0352 155 PANTHER T22J18.15-RELATED 15 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0352 Ssu-Chr5 7316774 7317241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0352 - - pvu:PHAVU_001G030900g 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0352 5 7316774 7317241 Ssu1g3679 1 92803582 92806541 PCT