Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0349 ATGGCTGCTCTCAAATATGCTCATACTTTCTATCCGCATTATAACTGCAACATCTTCCTTAGTCCCTACCAATCCGTAGGAATTTCAAACCCTTCAACAGAGTCACCTCAAATGGCTTCAGCAACACCCAAACAGAAAAAAAGACTAGGAGATTTTCTCAGTGAGCAACAAGAACCCTTCATCCTAGAGGTTCACCTTTCAGAAAGAGTGTACTCAAAAAGGTGGAGTTTGAATGGAGATTCAAGCATCACTTCAGAGAAACCAACCACATCCGGcttgaacaaaaagaaaaatgctctACTCCCATTTTACCAAGTTCTGAAATCTCTATATAACAAGCTTGCTTTCCACAAAGAAAGCAAAAGTACTCTAACCAAGGTTCATGAGTATGACCAAAGAAACAAACATGCAGGTGTCCCTCAATCTACCCGGGTCGACCATATTGTTCAGTTTTCATCAGATAGGAGCTCTTCTATGCTCAATTCACGCTCAGATATTGATGAAGAGGGAAATTCCATATTGTCACATGAGGACCAGCACTTGTTTTATTCTCACACTTTAAGCAACATGGAACCGCAGAGAAGGCAGCGGCAGAGATGCATAGAAGGTAGCCCTGAATCACTGGGAAAGAGACCTGTACGCAGAGTTCCAAATGTGAGTGAGGATGTTAGGAGAATGCAACAGAGGATAAGGAGTTGCGGTGTTATTCTGCCAAAGAAAATCAGAGAGGACTCGTTGTTATCAGCTGCTATCTGGAGTAGTTTACTTGATCAgtcaataaagaaaaggaattgtACTAGGGGGTTAGGAGAGCTTCTTCCTGGGACTAATGATGTTTCCCAGATATTGAAATCTAAAAGGGTATTGCATAGGATAAAGAAGATGCTGTTTGATTGTGTAAAAGATATTACGATAACCCTTCCAACAGAAGACGACAGAAAGGAAGGATACAGACAATTCATGGGGCCCCCAGAGATCGGAAACCTCGTTCGTcagagaacaaataaaaggggtCAACAAGGTTTTGATAGAGCAAACCTCACCCACTTATTGACTTTGGATTATTTGAACTCAATCATGGAATGGAGTAGGTTCGAACCGCACGTGAGGGACATTGGCATTGAGATCACCGATGCAATTTTGGATAACATCCACAATGAAATTGTATCAGAAATGATTGGAGCTTTgacatcaaatatataa 1203 0.3915 MAALKYAHTFYPHYNCNIFLSPYQSVGISNPSTESPQMASATPKQKKRLGDFLSEQQEPFILEVHLSERVYSKRWSLNGDSSITSEKPTTSGLNKKKNALLPFYQVLKSLYNKLAFHKESKSTLTKVHEYDQRNKHAGVPQSTRVDHIVQFSSDRSSSMLNSRSDIDEEGNSILSHEDQHLFYSHTLSNMEPQRRQRQRCIEGSPESLGKRPVRRVPNVSEDVRRMQQRIRSCGVILPKKIREDSLLSAAIWSSLLDQSIKKRNCTRGLGELLPGTNDVSQILKSKRVLHRIKKMLFDCVKDITITLPTEDDRKEGYRQFMGPPEIGNLVRQRTNKRGQQGFDRANLTHLLTLDYLNSIMEWSRFEPHVRDIGIEITDAILDNIHNEIVSEMIGALTSNI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0349 400 PANTHER DUF4378 DOMAIN PROTEIN 38 399 - -
Ssu5g0349 400 PANTHER - 38 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0349 Ssu-Chr5 7289429 7290988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0349 - - gmx:100820463 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0349 5 7289429 7290988 Ssu1g3680 1 92826854 92828549 PCT