Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0346 ATGGCAGCGACTTCTACCTCTTCAAGCTGCAGTGGCTTCTTCACTCTCCGATCAACAGATAGTGGTGAGTCAAGGGTCCGGGGTTGCGGAAAGCCTGATGGGGTGGCCATGTGGTTCATCAATGGTGTCACAACCGCTTTCTTTGCCTCCTTGGAACATTGCTGCATCCGTATCGCCACCGAAGAAGACGTTGATGATGCCAACGACGACATGCCCTTGATCCTCAACGACGGAAATCTCCGCCGCCGTGatgccgccgccaccaccacacGAAGAaggaaagtgaaaggaaagaaaagttaG 303 0.4587 MAATSTSSSCSGFFTLRSTDSGESRVRGCGKPDGVAMWFINGVTTAFFASLEHCCIRIATEEDVDDANDDMPLILNDGNLRRRDAAATTTRRRKVKGKKS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0346 100 MobiDBLite consensus disorder prediction 1 27 - -
Ssu5g0346 100 MobiDBLite consensus disorder prediction 1 22 - -
Ssu5g0346 100 PANTHER PROTEIN, PUTATIVE-RELATED 5 99 - -
Ssu5g0346 100 PANTHER PROTEIN, PUTATIVE-RELATED 5 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0346 Ssu-Chr5 7221021 7221323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0346 - - gmx:100791560 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0346 5 7221021 7221323 Ssu1g3683 1 92873811 92874179 PCT