Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0342 ATGAGGAGCAAGGGGCAGAGCCAGAGCATGTTGGTGAGGATCGTAGCGTCCCCGATCCGAGCACTGGGAAAAGCGCGGGACATGTACGTGCGGAGCATAACGAACTGCGGTCAGCACATGAGCTACGGCGACCCCGCGGAAGGTGCTGGAAGGTTCTCGAGGAGCCACAGCGTGGCCACGTCGACGAGGTCCGAGGTTAGCGAGGACTACGCGGAGCTCGTGAGAGCGGCGTCGGCGAGGACCTTGGTCAGTCGAATTGACATGGATTTGGTcctcaaacaacaacaacatcatggGAATTCCAAAGGGTTGCCCAAGTCGAGCAGCGTTGGGATGGCGAGGATTGACGAGGATAACCCTTCCGACGCCGAAGGGGCCGTGGCTTTTGTCGCCGACCCGTATCCGAGAAGTAGAAGCTACGCCGTGGGGAAGAGAAAACCCGCTTTTGAAACCGCTGTTCATTCTCACGATTTTGTGATCCCAAGTGGTACTCTTGTCGGTTGA 504 0.5556 MRSKGQSQSMLVRIVASPIRALGKARDMYVRSITNCGQHMSYGDPAEGAGRFSRSHSVATSTRSEVSEDYAELVRAASARTLVSRIDMDLVLKQQQHHGNSKGLPKSSSVGMARIDEDNPSDAEGAVAFVADPYPRSRSYAVGKRKPAFETAVHSHDFVIPSGTLVG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0342 167 PANTHER - 4 145 - -
Ssu5g0342 167 PANTHER OS07G0123800 PROTEIN 4 145 - -
Ssu5g0342 167 PIRSF UCP031279 1 155 IPR016972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0342 Ssu-Chr5 7120564 7121067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0342 - - gmx:100798910 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0342 5 7120564 7121067 Ssu5g0342 5 7120564 7121067 ECH
Ssu5g0342 5 7120564 7121067 Ssu1g3688 1 92972978 92973445 PCT