Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0336 ATGCAAAAGATGGCTCAAGATGATGCTGCAAGCAACAATGCAAGTGGTGCCCCTGACAACAGTGCTGGAGGTGTTGGTGGAGGGTGTGGCACTAACAAAAATGCCAGTGGCCCTAACAAAAATGCAAGTGGTGCGAAAAAAGTGGAGGAGGTGCAGCCACATGCTGTGCAAGAGCAATTACCTGGAGTTCAATATTGCATTAAGAGTCCTCCTCCATGGCGTGAAGCACTGCTATTGGGGTTTCAGCATTACCTTTTGACTCTTGGCATGACCGTATTGATTCCAACTATACTTGTTCCTCAAATGGGTGGAGGAGATGCTGAGAAGGCTAGGGTGATACAGACCCTTCTTCTTGTTTCTGGAATAAGCACATTTCTTCAATCTTTGTTCGGAACTCGACTTCCAATTGTAGTTGTTGGTTCATACACTTACATAGTACCCATAATTTCCATTATCCAAGCCAGCAGATATACTTCATACACAGATCCTTATGAGAGGTTTACTCAGACAATAAGAGGGATTCAAGGTGCCTTGATCACAACTGCATGTTTCCAGATGGCTATTGGATTTTTCGGTTTTTGGAGGAATGCTGTTAGGTTCCTTAGTCCACTTTGTGTAGCCCCTTATGTAACTTTCACTGGACTCGGTCTCTATCGTCTTGGTTTCCCAATGCTGGCAAAATGTGTTGAAGTTGGGCTTCCAGCACTAATTATCTTTTATCTTAATCGTTATATTGCCACCAAGAAGCCTATATATGACCGATTTTCAGTGCTATTCACTGTTTCAAGCGCATGGTTATTTGCACTGTTTCTAACTTCATGCACTGTGTATAACCACAAGCCAGAAAGTACACAGAATAGTTGCCGCACTGATCGTGCTGGACTTATTAGTGCTTCTCCATGGGTGTATTTTCCTCGCTTCTTCCAATGGGGGCCTCCTACTTTCAATGCTGGGGAGGCTTTTGCTATGGTCGCTGCTTCTTTGGTTTCTCTTTTTGAGTATACTGGTACATGTTATGCTGCGGCAAGATATGGAAGTGCCACACCAGTGCCACCATCTGTTATCAGCCGCGGAGCTGGCTGGGTGGGAGTAAGTGCTTTGCTCAATGGCGTGTTTGGCTCTATAACTGGATGTACGGCATCAGTGGAAAATGCTGGTTTATTGGCATTGACAAAAGCAGGAAGCCGAAGAGTCATCCAAATATCATCTGGTTTTATGATTTTCTTCTCTATATTTGGCAAATTGGGAGCAATTTTTGCTTCAGTACCAATGCCAATTATAGCAGCATTATATTGTGTGTTATTCGGCTATGTGTCTTCTGCAGGTCTTGGTTTTCTCCAATTCTGCAACCTCAacaatttcaaaaccaaatttgtGTTGGGCTTCTCATTCTTCCTAGGCATCTCCATACCACAATATTTCTCGGAATATTATAATGTGAAGCAGCATCATGAAGTTCCTAGATGGTTCAATGATGTTGTCACTGTCATCTTCATGTCCCACACAACAGTTGCTGCCTTGGTTGCTTTCATTTTGGATGTCACACTGTCTCGTGAAGATGATGCAGCACGTAAAGACATCGGTTTGCAGTGGTGGGAGAGGTTCAGCTTGTACAGCGCAGATGTTAAGAATGATGAATTCTATTCTTTACCATGCAGGCTCAATAAGCTTTTTCCACCCATTTAA 1686 0.4294 MQKMAQDDAASNNASGAPDNSAGGVGGGCGTNKNASGPNKNASGAKKVEEVQPHAVQEQLPGVQYCIKSPPPWREALLLGFQHYLLTLGMTVLIPTILVPQMGGGDAEKARVIQTLLLVSGISTFLQSLFGTRLPIVVVGSYTYIVPIISIIQASRYTSYTDPYERFTQTIRGIQGALITTACFQMAIGFFGFWRNAVRFLSPLCVAPYVTFTGLGLYRLGFPMLAKCVEVGLPALIIFYLNRYIATKKPIYDRFSVLFTVSSAWLFALFLTSCTVYNHKPESTQNSCRTDRAGLISASPWVYFPRFFQWGPPTFNAGEAFAMVAASLVSLFEYTGTCYAAARYGSATPVPPSVISRGAGWVGVSALLNGVFGSITGCTASVENAGLLALTKAGSRRVIQISSGFMIFFSIFGKLGAIFASVPMPIIAALYCVLFGYVSSAGLGFLQFCNLNNFKTKFVLGFSFFLGISIPQYFSEYYNVKQHHEVPRWFNDVVTVIFMSHTTVAALVAFILDVTLSREDDAARKDIGLQWWERFSLYSADVKNDEFYSLPCRLNKLFPPI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0336 561 MobiDBLite consensus disorder prediction 1 48 - -
Ssu5g0336 561 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 37 560 - -
Ssu5g0336 561 MobiDBLite consensus disorder prediction 1 19 - -
Ssu5g0336 561 Pfam Permease family 75 474 IPR006043 GO:0016020|GO:0022857|GO:0055085
Ssu5g0336 561 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 37 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0336 Ssu-Chr5 7041318 7046702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0336 47 559 Organic Solute Cotransporters AT1G65550 62.689 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0336 - - gmx:100801755 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0336 5 7041318 7046702 Ssu5g0336 5 7041318 7046702 ECH
Ssu1g3694 1 93148435 93152370 Ssu5g0336 5 7041318 7046702 PCT