Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0312 ATGGTTGCTGCAATTTCTACGACGATAAACCCCAAGCGAGCTCAGACGCCAACTCAGAGGAGGACTCCTCTGTTACCTTCTGAATCGGACAATGCGCTCGCTCCTCCACGCAGGCCCAAAGCACGAGAGGTTACTTCTCGCTACATGTCTTCTTCTTCGTCTTCGTCTTCCTCCGTTTCGTCTCCTCCGAGACGATGCCAATCGCCGCTGGTAACGAAAACGGTGAATTCGACGAGAGCGAAGCAAACGCCGACGCCGTTGGCGAAGCGGTCGCAGTCGGCGGAGCGCCGGCGACAAGGCACTCCTCGACCTGCCGGAACGGACGCTCCTGTCGCTCAGAAAGTGCTCTTCACTTCTACCAGGAGTTTGTCCGTCTCGTTCCAGGGCGAGTCGTTCCCGATCCAGGTCCGAACGACGAAACCACCGCCGTCGCAGAGTTTCCGGAAGAGCACGCCGGAGAGGAGGAAGGTCGCGACGACGCCGACGCCGGTGAGAGGAGCTGGAAACGGCAATTCGGATCACACCGAGAATGCGAGGTCACTGGATCGGCACCGGTGGCCGGGAAAATTGCAACCGACGCCGCCGGCGACGCAACAGAATGCGAATTGCGTGAACCGAAGCTTGGACTGTGCCGATTCCGCCGCGAGAAAGCAAACGGACGCGCCGGCGAACGTCGTTAGGTCGTTGCAGAATGTGATGGCGGACGTTCGCGCTTCTCACGACGCGACACTGAGGTCAGAGAGTTACAAAATTAACGGATCTGAGTTTCAGCACGAGCCCGAGCCTCTTCCTTCTGATACCGAAAGTGTAACTTCTGGAAGTTCCTCTGGTGAAGGACAATTACAGCGAGGTTCTCGAGGGATCGTGATGCCGGCGCGGTTCTGGCAAGAGCATAATAATCGGTTACGGCGCCAAACGGAGACTCCGTCTTCTAGAAACGGTGTAATTGGAAACAAAGCAACGGTTACTACTCCTAGTCCTAGGCTTCTGGTGCAGAAGAAGTTACCGTTGGATTGTCCTGTTTCGTCGCCACGTGGAGTTGTGAACGGCCGTCTCCAAGGTTCTCCTATTCGTTCTGCGGTGCGTCCTGCTTCTCCGAGTAAGCTAGCGACGACGCCGTCTGTGTGGTCTCCTTCGAGAGGAGTGAGTCCCTCTCGTGCGCAAAACGGCGTCGTCAGTAGTAGGTTCGGTAGCGAACCTTCTGTTTTGAGTTTCGCTGTTGATGTTCCGAGGGGGAAGGTAGGGGAGAACCGGATTGTTGACGCGCATTTATTGAGACTCTTCCATAACAGGCTCCTTCAGTGGCGTTTTGTTAACGCCAGAGCCGATGCTGCCCTCTCTGCGCAGACATTGAATGCGGagAGAAGCCTGTATGATGCATGGGTAGCTACCTCGAAACTTCGAGAATCTGTTAGAGCAAAAAGAACAGAGTTTCAGTTGCTGAAGCAACAGTTTAAGCTAATATCCATCCTGAAGGATCAAATGGTGTATTTGGAAGATTGGGCTACTTTGGATCGGGTGTACTCTAGTTCACTTTCAGGAGCTACTGAAGCCCTAAGGGCTAGCACTCTTCGTCTTCCTGTTGTTGGTGGGGCCAAGACAGACTTGCTAAATTTGAAGGATGCAATTTGTTCAGCAATGGATGTGATGCAGGCAATGGCGTCCTCCATATGCCTATTGTCGCCAAAGGTTGGGCAATTAAATTCGCTGGTTGTTGAAGTTGCCAACTTAAGTGCGAAGGAGCGTGTTTTGCTTGAAGAGTGCAGAGACCTTTTGTCAGTGATTACAACCTTGCAGGTTAGAGAGTATAGCCTGAGAACGCATATTGCTCAACTGAAATGCCTACCCAGAAGTACAACAGTGAAAATAACAAGCAAATAA 1881 0.5284 MVAAISTTINPKRAQTPTQRRTPLLPSESDNALAPPRRPKAREVTSRYMSSSSSSSSSVSSPPRRCQSPLVTKTVNSTRAKQTPTPLAKRSQSAERRRQGTPRPAGTDAPVAQKVLFTSTRSLSVSFQGESFPIQVRTTKPPPSQSFRKSTPERRKVATTPTPVRGAGNGNSDHTENARSLDRHRWPGKLQPTPPATQQNANCVNRSLDCADSAARKQTDAPANVVRSLQNVMADVRASHDATLRSESYKINGSEFQHEPEPLPSDTESVTSGSSSGEGQLQRGSRGIVMPARFWQEHNNRLRRQTETPSSRNGVIGNKATVTTPSPRLLVQKKLPLDCPVSSPRGVVNGRLQGSPIRSAVRPASPSKLATTPSVWSPSRGVSPSRAQNGVVSSRFGSEPSVLSFAVDVPRGKVGENRIVDAHLLRLFHNRLLQWRFVNARADAALSAQTLNAERSLYDAWVATSKLRESVRAKRTEFQLLKQQFKLISILKDQMVYLEDWATLDRVYSSSLSGATEALRASTLRLPVVGGAKTDLLNLKDAICSAMDVMQAMASSICLLSPKVGQLNSLVVEVANLSAKERVLLEECRDLLSVITTLQVREYSLRTHIAQLKCLPRSTTVKITSK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0312 626 MobiDBLite consensus disorder prediction 264 282 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 1 112 - -
Ssu5g0312 626 PANTHER AUGMIN FAMILY MEMBER 1 619 - -
Ssu5g0312 626 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 1 619 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 301 321 - -
Ssu5g0312 626 Pfam QWRF family 269 586 IPR007573 -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 365 393 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 45 90 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 255 288 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 1 26 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 134 148 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 357 393 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 134 202 - -
Ssu5g0312 626 MobiDBLite consensus disorder prediction 306 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0312 Ssu-Chr5 6602808 6608806 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0312 5 6602808 6608806 Ssu5g0312 5 6602808 6608806 ECH
Ssu5g0312 5 6602808 6608806 Ssu1g3720 1 93525526 93529508 PCT