Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0459 ATGGCGAAAAAGGCGGTTTTGATCGGAATCAACTACCCAGGCACGAAGGCGGAGCTGAAAGGGTGCATAAACGACGTGTGGCGGATGCACCGATGTCTCACCGAGCGCTACGGTTTCTCCGAAGACGACATCACCGTTTTGATCGACACGGACAAGTCGTACATGGAGCCCACGGGCCGGAACATTCGGTCCGCGTTGACCAGGCTGGTCCGATCGGCCGAGCCAGGGGACGTGCTGTTCGTGCACTACAGCGGACACGGCACGCGCCTCCCCGCGGAAACCGGAGAGGACGACGACACTGGATACGATGAATGCATTGTTCCTTCTGACATGAACCTCATCACTGATGATGATTTCAAGGAATTTGTTGATGGGGTCCCTAGAGGTTGCAGGATCACAATTGTGTCTGATTCTTGCCACAGTGGTGGCCTACTTGAAGAAGCTAAGGAGCAGATAGGAGAGAGCACAAAGGGAGAGGAGCAACATTCTGGCTCTGGCTTTGGATTGTCAAGCTTTCTACATCGGACTGTGGAAGATGCCATTGAGTCTCGCGGATTCCATGTCCCTTCGGCATTGCGCCACCATAGAGGCAGGGATGATGGTGAAGAAGTTGAAGATAGGGATATTGAACTTCCACATGGGCACTATGGCTATGTAAAGAATAGATCTTTGCCCCTTCCAACCCTCATTGATATACTCAAGCAGAAAACTGGGAAAGATGATATAGATGTTGGGAAACTGAGACCTACACTTTTTGGTGTTTTTGGGGAAGATGCTAGTCCCAAAGTGAAGAAGTTCATgaatgttattttgaataaactcCAACATGGAAGTGGTGAAAGTGGGGAACATGGTGGTGGAATATTGGGGTTGGTGGGTGGTCTTGCCCAAGAGTTTCTCAAGCAAAAGCTTGATGAGAATGATCAGGGATATGCAAAGCCTGCACTTGAGACACATGTGGAAAGCAAGCATGAGGTATATGCTGGATCAACCAAACGCGGCCTTCCGGATGGTGGGATTCTGATGAGTGGCTGTCAGACTGACCAAACTTCTGCAGATGCAAGTCCTTCAGGAAACTCTGCCAGTGCTTATGGAGCCTTTAGCAATGCAATACAGGCTATAATTGAGGAGACTGATGGTGCAATCACAAACCAAGAGCTTGTTTATAAGGCAAGAGAGAAGCTGAAGAGGGGAGGTTTCACTCAAAAACCTGGACTCTATTGCAGTGATCACCATGTTGATACTCCTTTTGTGTGTTGA 1260 0.4857 MAKKAVLIGINYPGTKAELKGCINDVWRMHRCLTERYGFSEDDITVLIDTDKSYMEPTGRNIRSALTRLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFKEFVDGVPRGCRITIVSDSCHSGGLLEEAKEQIGESTKGEEQHSGSGFGLSSFLHRTVEDAIESRGFHVPSALRHHRGRDDGEEVEDRDIELPHGHYGYVKNRSLPLPTLIDILKQKTGKDDIDVGKLRPTLFGVFGEDASPKVKKFMNVILNKLQHGSGESGEHGGGILGLVGGLAQEFLKQKLDENDQGYAKPALETHVESKHEVYAGSTKRGLPDGGILMSGCQTDQTSADASPSGNSASAYGAFSNAIQAIIEETDGAITNQELVYKAREKLKRGGFTQKPGLYCSDHHVDTPFVC 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0459 419 PANTHER METACASPASE-4 1 419 - -
Ssu2g0459 419 SUPERFAMILY Caspase-like 6 122 IPR029030 -
Ssu2g0459 419 Pfam Caspase domain 3 411 - -
Ssu2g0459 419 Gene3D - 1 176 - -
Ssu2g0459 419 Gene3D - 306 418 - -
Ssu2g0459 419 PANTHER METACASPASE-5 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0459 Ssu-Chr2 26471226 26474310 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1503 8 30808641 30813923 Ssu2g0459 2 26471226 26474310 PCT