Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0343 ATGGAAGGGCTTCAGCAATTCCTTCATTTCCTCTTTATAGCTTCTCTTCTTATCATCAGTACAGCAATTTCAGATCAAATTCCCAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAGGCAACACTGGGGCAGAAGGCCAAATACCAGATTCAACTCATCTGCAGCTATTGTCCTCAATTATTCCAAGAGAAGAAAGTGAGAGGATAGCTCCAATCCACCATTTCAGTCATGCCTTTAGAGGGTTCTCTGCCATGCTTACAGAGAGTGAAGCTTCTGCACTATCAGGTCACGATGGTGTGGTGTCAGTGTTCCCAGATCCAGTGCTTCAGTTACACACAACGCGATCTTGGGACTTCTTAGAATCAGATTTGGGAATGAAGCCTCCCGGCACTTCCACACACCAACACTTATCAAGCGATATCATTATTGGTGTGATAGACACAGGGATATGGCCAGAGTCTCCAAGTTTCAGAGATGAGGGTATAGGGGGGATTCCTTCAAGATGGAAAGGAGTTTGCATGGAAGGTCATGATTTCAAGAAATCCAATTGCAATAGAAAATTGATAGGTGCAAGATACTATAATATTCAAGTTACATCAGGTGGCAACCAGACTCATATAGAAGCAACCAAAGGTTCCCCAAGAGATTCTGTTGGACATGGGACTCACACTGCATCAATAGCAGCTGGTGTTCATGTCAACAATGCTAGCTACTTTGGTTTAGCACAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCTTATAAAACGTGCTCAGAAGAAGGCTGCTCTGGTGCCACCATACTAAAAGCTATTGATGATGCTATAAAGGATGGAGTAGATATAATCTCAATCTCTATTGGACTTAGCTCATTATTCCAATCAGACTTTTTGAGTGATCCTATAGCCATTGGAGCATTTCATGCGGAACAAATGGGGGTCATGGTGGTGTGTTCAGCTGGCAATGATGGTCCTGATCCTTACACAGTTGTGAACACAGCACCATGGATATTTACAGTTGCAGCTTCTAATATTGATAGGAACTTCCAGTCAACTATTGTCCTTGGAAATGGAAAATCTTTCCAAGGTACAGGCATTAACTTTTCAAACCTTACTCATTCCAAGATGCATCATCTTGTCTTTGGAGAGCAAGTTGCTGCCAAGTTTGCCCCTGCATCAGAAGCTAGGATGCAAGAGCCTATAGGGATGATACTCATTGATGAGGACAACAAAGATGTTCCCTATGATGCAGGTGTATTTCCCTTCACTGAGGTTGGAAATCTTGAAGGGCATAAGATCCTAGAGTACATAAACTTCACCAAGAACCCAACTGCAACAATTCTTCCAACAACAGAAACTACTAGATATCAGCCTTCGCCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAAGCCTTACAGAAAACATTCTCAAGCCAGATGTCATGGCGCCAGGAATTGGCATTTTGGCTGCCATGATTCCTAAAAGTAATGAACCAGGGAGTGTTCCAATTGGGAAAAAGCCATCCTTATTTGGCATAAAATCTGGTACATCTATGGCTTGCCCACATGTGACAGGTGCAACAGCATTCATTAAATCAGTGCACGAAAAATGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAAACTACAACAACTTGAGGAAGCCTCTTACTAATAGCTCAAACTACCTCGCTAACCCGCATGAAATGGGAGTTGGGGAAATTAATCCACTTAGAGCTCTCAACCCTGGCTTAGTCTTTGAAACAGAATTGGAAGAATATCTTAGATTCCTTTGTTATTTTGGCTATTCAAAGAAAAACATAAGGGCAATGTCTAAGACTAACTTTAACTGCCCAAGGAACTCCTCTGAAGACCTTATCTCCAACATCAATTATCCATCAATATCTGTAAGTACActtaaaaggaaacaaaaagcaaaagtaattacaagaACAGTTACCAATGTTGGATCCCTTAATGCCACATACACTGCAAAAGTGCGTGTACCCAAGggattggttgtgaaggtcATCCCCAATACACTTGTATTTTCTGAGGGTGTTCAAAGAATGACCTATAAAGTCTCATTCTATGGCAAGGAAGCCAATGGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTCACCATTATGTTCATACAGTTTTTTCAGTCAAAGTTGAATAA 2217 0.4069 MEGLQQFLHFLFIASLLIISTAISDQIPKPYVVYMGNSSPGNTGAEGQIPDSTHLQLLSSIIPREESERIAPIHHFSHAFRGFSAMLTESEASALSGHDGVVSVFPDPVLQLHTTRSWDFLESDLGMKPPGTSTHQHLSSDIIIGVIDTGIWPESPSFRDEGIGGIPSRWKGVCMEGHDFKKSNCNRKLIGARYYNIQVTSGGNQTHIEATKGSPRDSVGHGTHTASIAAGVHVNNASYFGLAQGTARGGSPSTRIAAYKTCSEEGCSGATILKAIDDAIKDGVDIISISIGLSSLFQSDFLSDPIAIGAFHAEQMGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTIVLGNGKSFQGTGINFSNLTHSKMHHLVFGEQVAAKFAPASEARMQEPIGMILIDEDNKDVPYDAGVFPFTEVGNLEGHKILEYINFTKNPTATILPTTETTRYQPSPIVASFSSRGPSSLTENILKPDVMAPGIGILAAMIPKSNEPGSVPIGKKPSLFGIKSGTSMACPHVTGATAFIKSVHEKWSPSMIKSALMTTATNYNNLRKPLTNSSNYLANPHEMGVGEINPLRALNPGLVFETELEEYLRFLCYFGYSKKNIRAMSKTNFNCPRNSSEDLISNINYPSISVSTLKRKQKAKVITRTVTNVGSLNATYTAKVRVPKGLVVKVIPNTLVFSEGVQRMTYKVSFYGKEANGGYNFGSLTWLDGHHYVHTVFSVKVE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0343 738 Pfam Fibronectin type-III domain 638 732 IPR041469 -
Ssu2g0343 738 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Ssu2g0343 738 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 398 733 - -
Ssu2g0343 738 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 67 390 - -
Ssu2g0343 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 67 390 IPR045051 -
Ssu2g0343 738 Gene3D - 350 400 - -
Ssu2g0343 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 398 733 IPR045051 -
Ssu2g0343 738 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Ssu2g0343 738 Gene3D Peptidase S8/S53 domain 141 349 IPR036852 GO:0004252|GO:0006508
Ssu2g0343 738 Gene3D Peptidase S8/S53 domain 410 606 IPR036852 GO:0004252|GO:0006508
Ssu2g0343 738 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Ssu2g0343 738 SUPERFAMILY Subtilisin-like 112 594 IPR036852 GO:0004252|GO:0006508
Ssu2g0343 738 Gene3D - 607 737 - -
Ssu2g0343 738 Pfam Subtilase family 139 561 IPR000209 GO:0006508|GO:0008236
Ssu2g0343 738 CDD Peptidases_S8_3 110 557 IPR034197 -
Ssu2g0343 738 CDD PA_subtilisin_like 356 451 - -
Ssu2g0343 738 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Ssu2g0343 738 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Ssu2g0343 738 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Ssu2g0343 738 ProSiteProfiles Serine proteases, subtilase domain profile. 117 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0343 Ssu-Chr2 22079935 22092381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0343 31 735 Subtilisin-like Serine Gene Family AT1G20150 41.656 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0343 K25898 - gmx:100781053 1247.65